Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E09
         (883 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM177180-1|CAJ45484.1| 1670|Homo sapiens kinesin-like protein KI...    31   5.5  

>AM177180-1|CAJ45484.1| 1670|Homo sapiens kinesin-like protein KIF21B
            variant protein.
          Length = 1670

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
 Frame = +2

Query: 269  SESEDENSLSLKGFRVKHRQWKSKVDVKRYSFSKMNITQVTAKFTDGDSTCNELKRISSL 448
            SE     S ++KG    H  +KSK + K  +  K    +      D  ST N  K ++SL
Sbjct: 1116 SEGSFSQSFTMKG-STSHDDFKSKSEPKLSAQMKAVSAECLGPPLD-ISTKNITKSLASL 1173

Query: 449  AEVKGTNPGDDKVRAFF-ERLLQSVPPPPVEDLLSTTTNANITS 577
            AE+KG   G      ++ +R+ ++V  P         T A  TS
Sbjct: 1174 AEIKGDGVGFSVRDPYYRDRVSRTVSLPTRGSTFPRQTRATETS 1217


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,256,565
Number of Sequences: 237096
Number of extensions: 2499119
Number of successful extensions: 5924
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5911
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)