Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E09
         (883 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025451-2|AAK68202.1|  612|Caenorhabditis elegans Hypothetical ...    30   2.5  
AF025451-1|AAB71201.1|  610|Caenorhabditis elegans Hypothetical ...    30   2.5  
Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF038605-6|AAB92018.2|  247|Caenorhabditis elegans Hypothetical ...    29   5.8  

>AF025451-2|AAK68202.1|  612|Caenorhabditis elegans Hypothetical
           protein C24H12.5b protein.
          Length = 612

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 482 KVRAFFERLLQSVPPPPVEDLLSTTTNANITSICEAPKRNNDFE 613
           K R+    +L +VPPPP  D          T  C AP  NN F+
Sbjct: 17  KRRSSCRNILNAVPPPPPTDFEGL---EGFTDSCPAPTANNPFK 57


>AF025451-1|AAB71201.1|  610|Caenorhabditis elegans Hypothetical
           protein C24H12.5a protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 482 KVRAFFERLLQSVPPPPVEDLLSTTTNANITSICEAPKRNNDFE 613
           K R+    +L +VPPPP  D          T  C AP  NN F+
Sbjct: 17  KRRSSCRNILNAVPPPPPTDFEGL---EGFTDSCPAPTANNPFK 57


>Z68317-4|CAA92688.1|  486|Caenorhabditis elegans Hypothetical
           protein T01H3.4 protein.
          Length = 486

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 272 ESEDENSLSLKGFRVKHRQWKSKVDVKRYSFSKM--NITQVTAKFTDGDST 418
           + EDEN   L+G+R +H   ++ +DV   S + +  N+T+    F  GD T
Sbjct: 265 KEEDEN---LEGYRARHNTVRTSIDVDSESKTDIDENLTEEGEVFEQGDCT 312


>AF038605-6|AAB92018.2|  247|Caenorhabditis elegans Hypothetical
           protein C02B10.3 protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = +2

Query: 248 KFPDIPRSESEDENSLSL---KGFRVKHRQWKSKVDVKRYSFSKMNITQVTAKFTDGDST 418
           K  DIP     DE+   L    G   +  +WK +V    Y   K  + +V A   +G  T
Sbjct: 32  KLSDIPIGSCGDESYFGLGIMDGGLEECDRWKLEVTNPEYEEYKCKVLRVHASVQNGKCT 91

Query: 419 CN 424
           CN
Sbjct: 92  CN 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,247,193
Number of Sequences: 27780
Number of extensions: 418617
Number of successful extensions: 1270
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)