Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_E05
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 35 0.077
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886... 32 0.54
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.7
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 2.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.8
07_01_0862 - 7172083-7172931 29 3.8
06_03_1153 - 28047125-28047751 28 8.8
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 28 8.8
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.1 bits (77), Expect = 0.077
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +3
Query: 609 PKXXPPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGG-GXSXXPPPKKKXXPPP 782
PK PPP K PPP G PP GG G PPPK PP
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 33.1 bits (72), Expect = 0.31
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 621 PPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPPPKKKXXPPP 782
PPP K PPP K P PP G PPPK PPP
Sbjct: 316 PPPPKPAAAAPPPPPP--PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
Score = 31.5 bits (68), Expect = 0.95
Identities = 21/57 (36%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Frame = +3
Query: 621 PPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPPPK---KKXXPPP 782
PPP K PPP K P PP G S PPP KK PPP
Sbjct: 326 PPPPPPPKAAPPPP---PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/59 (25%), Positives = 15/59 (25%)
Frame = +3
Query: 693 PGXXXXPPXXXGGGGXSXXPPPKKKXXPPPXXKXXXXXXXXXXXXXXXXXXXLXPPPPP 869
P PP PPPK PPP PPPPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPP 369
>03_05_1153 +
30787574-30787608,30787982-30788089,30788651-30788689,
30789181-30789184,30789496-30789580,30789609-30790321
Length = 327
Score = 32.3 bits (70), Expect = 0.54
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = +3
Query: 621 PPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPPPKKKXXPPP 782
PPP + +K PPP P PP PPPK++ PPP
Sbjct: 194 PPPKEEEKPEPPPAVIIVEPPAPAPEPEPEPPKKE----PPPPPPPKQEPCPPP 243
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = +3
Query: 609 PKXXPPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPPPKKKXXPPPXX 788
P+ P P K ++ PPP ++K P PPKK+ PPP
Sbjct: 179 PEPEPEPPKKEEPQPPPP---KEEEKPEPPPAVIIVEPPAPAPEPEPEPPKKEPPPPPPP 235
Query: 789 K 791
K
Sbjct: 236 K 236
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 609 PKXXPPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPPPKKKXXPP 779
P PPP + PPP H G PP G GG P P PP
Sbjct: 1160 PPAPPPPAGFRGGTPPP--------NAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPP 1208
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +3
Query: 609 PKXXPPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPPPKK 764
P+ PPP PPP K PG PP G + PPP K
Sbjct: 587 PEPSPPPAPKAAPPPPPP------KSTGPGPPRPPPPAMPGSSKTRPPPPLK 632
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/85 (23%), Positives = 22/85 (25%), Gaps = 2/85 (2%)
Frame = +3
Query: 621 PPPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPPPKKKXXPPPXXKXXX 800
PPP PPP + P PP PPP PPP
Sbjct: 12 PPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFN 71
Query: 801 XXXXXXXXXXXXXXXXL--XPPPPP 869
+ PPPPP
Sbjct: 72 FGPGPPQQQQPPPPPQMYYQPPPPP 96
>07_01_0862 - 7172083-7172931
Length = 282
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Frame = +3
Query: 624 PPXKXKKXFPPPXFXFXXKKKXHPGXXXXPPXXXGGGGXSXXPP----PKKKXXPPP 782
PP K +PPP KKK P P + PP PKKK PPP
Sbjct: 164 PPRKKPLLYPPP---LPPKKKPLPPPSPPPQPPLPEKENTPLPPLLLPPKKKPLPPP 217
>06_03_1153 - 28047125-28047751
Length = 208
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +2
Query: 608 PQIXPPPXKXKKXXSPPQXXFXXXKKXPPGXGFXPPXXGXGGG 736
P + PPP SPP + P GF P G GGG
Sbjct: 18 PPLSPPPPPPPIFYSPPDVSYFSPPALPCYAGF-PACTGGGGG 59
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 684 KXHPGXXXXPPXXXGGGGXSXXPPPKKKXXPPP 782
K HP PP G PPP PPP
Sbjct: 90 KGHPAPTMPPPSSGSGHTLPSPPPPLPPLLPPP 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,250,662
Number of Sequences: 37544
Number of extensions: 312520
Number of successful extensions: 788
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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