Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_E04
(1027 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein. 68 6e-11
AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone oxidore... 68 6e-11
BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein. 64 6e-10
AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone oxidore... 64 6e-10
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 31 5.1
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 31 5.1
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 31 5.1
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 31 5.1
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 31 5.1
BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein. 31 9.0
BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and tetratri... 31 9.0
AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein. 31 9.0
AK127248-1|BAC86899.1| 596|Homo sapiens protein ( Homo sapiens ... 31 9.0
AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein. 31 9.0
>CR542121-1|CAG46918.1| 105|Homo sapiens NDUFB2 protein.
Length = 105
Score = 67.7 bits (158), Expect = 6e-11
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +2
Query: 182 QNAGDAGCLKQTKRNAGHGVWT---YRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEP 352
+ AGD G R+AG GV YR P + ++ + ++ GL W+WIL+ +
Sbjct: 24 RTAGDGGV-----RHAGGGVHIEPRYRQFPQL-TRSQVFQSEFFSGLMWFWILWRFWHDS 77
Query: 353 EHITGEWPYIDPSTWTDEELGIPPD 427
E + G +PY DPS WTDEELGIPPD
Sbjct: 78 EEVLGHFPYPDPSQWTDEELGIPPD 102
>AF050639-1|AAD05428.1| 105|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 105
Score = 67.7 bits (158), Expect = 6e-11
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +2
Query: 182 QNAGDAGCLKQTKRNAGHGVWT---YRVPPPMPSKKSIRLAQGLGGLCWWWILYHIATEP 352
+ AGD G R+AG GV YR P + ++ + ++ GL W+WIL+ +
Sbjct: 24 RTAGDGGV-----RHAGGGVHIEPRYRQFPQL-TRSQVFQSEFFSGLMWFWILWRFWHDS 77
Query: 353 EHITGEWPYIDPSTWTDEELGIPPD 427
E + G +PY DPS WTDEELGIPPD
Sbjct: 78 EEVLGHFPYPDPSQWTDEELGIPPD 102
>BC063026-1|AAH63026.1| 95|Homo sapiens NDUFB2 protein protein.
Length = 95
Score = 64.5 bits (150), Expect = 6e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 263 PMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPSTWTDEELGIPPD 427
P ++ + ++ GL W+WIL+ + E + G +PY DPS WTDEELGIPPD
Sbjct: 38 PQLTRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPSQWTDEELGIPPD 92
>AC006344-2|AAD43191.1| 95|Homo sapiens NADH-ubiquinone
oxidoreductase AGGG subunit protein.
Length = 95
Score = 64.5 bits (150), Expect = 6e-10
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +2
Query: 263 PMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPYIDPSTWTDEELGIPPD 427
P ++ + ++ GL W+WIL+ + E + G +PY DPS WTDEELGIPPD
Sbjct: 38 PQLTRSQVFQSEFFSGLMWFWILWRFWHDSEEVLGHFPYPDPSQWTDEELGIPPD 92
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 31.5 bits (68), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 341 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 442
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 31.5 bits (68), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 341 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 442
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 31.5 bits (68), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 341 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 442
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 31.5 bits (68), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 341 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 442
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 31.5 bits (68), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 341 ATEPEHITGEWPYIDPSTWTDEELGIPPDSAGCI 442
++ PE + G W +D ST T EL IP + GCI
Sbjct: 262 SSSPE-VKGYWASLDASTQTTHELTIPNNLIGCI 294
>BC114486-1|AAI14487.1| 1281|Homo sapiens SH3TC2 protein protein.
Length = 1281
Score = 30.7 bits (66), Expect = 9.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 389 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 228
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 883 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 933
>BC113879-1|AAI13880.1| 1288|Homo sapiens SH3 domain and
tetratricopeptide repeats 2 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 9.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 389 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 228
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 890 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 940
>AY341075-1|AAR03497.1| 1288|Homo sapiens KIAA1985 protein.
Length = 1288
Score = 30.7 bits (66), Expect = 9.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 389 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 228
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 890 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 940
>AK127248-1|BAC86899.1| 596|Homo sapiens protein ( Homo sapiens
cDNA FLJ45315 fis, clone BRHIP3005231. ).
Length = 596
Score = 30.7 bits (66), Expect = 9.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 389 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 228
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 437 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 487
>AB075865-1|BAB85571.1| 955|Homo sapiens KIAA1985 protein protein.
Length = 955
Score = 30.7 bits (66), Expect = 9.0
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -3
Query: 389 WDQYKATHQLYAQVQLQCDTESTTSTIHQALELTESIFWKALVAVHGTSKLHVL 228
W Q+ A + L V+L C+ +++ T +EL + W A V V G H L
Sbjct: 557 WAQHPARNYLLQAVRLYCELQASKET---DMELVQVFLWLAQVLVSGHQLTHGL 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,237,689
Number of Sequences: 237096
Number of extensions: 2268394
Number of successful extensions: 8298
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8246
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13820831500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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