Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_E02
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   2.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   2.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.6  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 737 LFQLSPPFEQH*PTAEMNHWRPIR 666
           +F+ + P   H    E+  WRP+R
Sbjct: 109 VFERTEPLSPHLLNLEVERWRPLR 132


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 398 LNNYSDPNFVENLQKNDLH 454
           +NNY+DP+ V N +   LH
Sbjct: 158 VNNYNDPSNVRNCELVGLH 176


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 341 NNATAGHEKLHEAMQMASELNNYSDPNFVENLQKNDLHKQE 463
           N  T    +L      + E+N+  + NF+ +  +NDL + E
Sbjct: 69  NQDTEKLNQLEIESDNSKEVNDKKEENFIVDRLRNDLFECE 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,211
Number of Sequences: 438
Number of extensions: 3783
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)