Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_D23
(1064 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 112 4e-25
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 110 2e-24
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 110 2e-24
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 108 8e-24
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 105 6e-23
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 95 8e-20
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 81 1e-15
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 77 3e-14
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 112 bits (270), Expect = 4e-25
Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 4/111 (3%)
Frame = +1
Query: 157 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 330
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 331 ARRSSWRVISSIEQKXE--GSERKQQMAKEYRVKVEKXLXEICYDVXGLXD 477
ARR+SWR+ISSIEQK E G+E + + KEYR K+E L +IC + L D
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLD 330
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 110 bits (265), Expect = 2e-24
Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 4/111 (3%)
Frame = +1
Query: 157 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 330
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 331 ARRSSWRVISSIEQKXE--GSERKQQMAKEYRVKVEKXLXEICYDVXGLXD 477
ARR+SWR+ISSIEQK E G+E + + K+YR K+E L +IC + L +
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLE 112
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 110 bits (264), Expect = 2e-24
Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 4/106 (3%)
Frame = +1
Query: 172 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 345
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 346 WRVISSIEQKXE--GSERKQQMAKEYRVKVEKXLXEICYDVXGLXD 477
WR++SSIEQK E G+E + KEYR K+E L +IC + L D
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLD 106
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 108 bits (259), Expect = 8e-24
Identities = 60/110 (54%), Positives = 75/110 (68%), Gaps = 4/110 (3%)
Frame = +1
Query: 160 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 333
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 334 RRSSWRVISSIEQKXE--GSERKQQMAKEYRVKVEKXLXEICYDVXGLXD 477
RR+SWR+ISSIEQK E G+E KEYR ++E L +IC + L D
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLD 111
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 105 bits (252), Expect = 6e-23
Identities = 57/108 (52%), Positives = 73/108 (67%), Gaps = 7/108 (6%)
Frame = +1
Query: 178 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 342
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 343 SWRVISSIEQKXE--GSERKQQMAKEYRVKVEKXLXEICYDVXGLXDK 480
SWR++SSIEQK E G+ A+ YR +VE L IC + L D+
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDE 117
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 95.1 bits (226), Expect = 8e-20
Identities = 44/99 (44%), Positives = 64/99 (64%)
Frame = +1
Query: 175 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 354
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 355 ISSIEQKXEGSERKQQMAKEYRVKVEKXLXEICYDVXGL 471
+ S+EQK ++ Y+ KVE L +C +V +
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSI 101
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 81.4 bits (192), Expect = 1e-15
Identities = 42/72 (58%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = +1
Query: 268 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKXEGSERKQQMA--KEYRVKVEKXL 441
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E L
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 442 XEICYDVXGLXD 477
IC + L D
Sbjct: 78 ARICDGILALLD 89
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 76.6 bits (180), Expect = 3e-14
Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +1
Query: 235 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKXE--GSERKQQMA 408
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE K E G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 409 KEYRVKVEKXLXEICYDVXGLXDK 480
EYR KVE + +IC DV + DK
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,190,085
Number of Sequences: 37544
Number of extensions: 324555
Number of successful extensions: 706
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3164520116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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