Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_D19
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    31   0.061
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.3  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   5.3  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 30.7 bits (66), Expect = 0.061
 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
 Frame = +3

Query: 336 PKKGSALEYAYIDVRDEYRDD--HTRLSVWVLDGDPGHTNLLKFALSEETFPHTLVILTV 509
           P++G   +  Y  VRD  RDD  H  L   +  G     +LL+  LS      TLV+  V
Sbjct: 231 PQEGLTWDSVYRKVRDTVRDDPAHKNLEEHIGMGKRTRADLLRIELSRSA-DSTLVLQEV 289

Query: 510 -AMTTPWGILXQLQSWASVLGDHIDQLNLXPEHRLQSKKHXSXN 638
             +    G+   +     +L  HID L    E +   K+    N
Sbjct: 290 QEIIGGSGVARVVTEMTELLVTHIDPLAEEQELKAALKEELQVN 333


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 429 HPAPKH*AECDHRDIHL*HLYTHIRVQT 346
           H  P    ECD+  + L  L  HIR  T
Sbjct: 208 HERPHKCTECDYASVELSKLKRHIRTHT 235


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 425 QHPNTEPSVIIAIFISNIYIRIFECRPLLWVFNTLQLC 312
           Q P T+ +V IA FI ++        PL++   + Q+C
Sbjct: 481 QIPATQTNVAIATFIQSLAPLNSAANPLIYCLFSTQVC 518


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,525
Number of Sequences: 2352
Number of extensions: 14347
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)