Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_D19
(882 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73422-14|CAD37351.1| 441|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z73422-13|CAA97773.2| 443|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z70307-16|CAC42262.2| 441|Caenorhabditis elegans Hypothetical p... 47 2e-05
Z70307-15|CAA94342.2| 443|Caenorhabditis elegans Hypothetical p... 47 2e-05
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 33 0.36
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 32 0.47
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 32 0.62
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 32 0.62
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 31 1.4
U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein ... 31 1.4
Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical pr... 30 2.5
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 30 2.5
AF078790-7|AAC26936.1| 272|Caenorhabditis elegans Hypothetical ... 29 3.3
U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical pr... 29 5.8
U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein ... 29 5.8
EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transport... 29 5.8
AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical ... 29 5.8
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 28 7.7
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 28 7.7
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 28 7.7
>Z73422-14|CAD37351.1| 441|Caenorhabditis elegans Hypothetical
protein C39E9.14b protein.
Length = 441
Score = 47.2 bits (107), Expect = 2e-05
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Frame = +3
Query: 132 MDTNGQANGLKSKKKENGDGKDNLWSAILEEVQNQGNTKLPSNKNVLVLGDNETGKTTLV 311
++ + AN + + D + +W +L + N V+VLGDN +GK++L+
Sbjct: 8 LEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTN----QGSTVIVLGDNRSGKSSLL 63
Query: 312 AKL-QGVEDPKKGSALEYAYIDVRDEYRD-----------------DHTRLSVWVLDGDP 437
++L + K S L Y + V+++ RD + ++ VW LDG+
Sbjct: 64 SRLDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSELLQIPVWSLDGNA 123
Query: 438 GHTNLLKFALSEETFPHTLVILTVAMTTPWGILXQLQSWASV 563
+LLK AL T + ILT ++ P ++ L+ WA+V
Sbjct: 124 ACASLLKHAL-PATPAEAIFILTASIDNP-NLIHSLKRWANV 163
>Z73422-13|CAA97773.2| 443|Caenorhabditis elegans Hypothetical
protein C39E9.14a protein.
Length = 443
Score = 47.2 bits (107), Expect = 2e-05
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Frame = +3
Query: 132 MDTNGQANGLKSKKKENGDGKDNLWSAILEEVQNQGNTKLPSNKNVLVLGDNETGKTTLV 311
++ + AN + + D + +W +L + N V+VLGDN +GK++L+
Sbjct: 8 LEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTN----QGSTVIVLGDNRSGKSSLL 63
Query: 312 AKL-QGVEDPKKGSALEYAYIDVRDEYRD-----------------DHTRLSVWVLDGDP 437
++L + K S L Y + V+++ RD + ++ VW LDG+
Sbjct: 64 SRLDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSELLQIPVWSLDGNA 123
Query: 438 GHTNLLKFALSEETFPHTLVILTVAMTTPWGILXQLQSWASV 563
+LLK AL T + ILT ++ P ++ L+ WA+V
Sbjct: 124 ACASLLKHAL-PATPAEAIFILTASIDNP-NLIHSLKRWANV 163
>Z70307-16|CAC42262.2| 441|Caenorhabditis elegans Hypothetical
protein C39E9.14b protein.
Length = 441
Score = 47.2 bits (107), Expect = 2e-05
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Frame = +3
Query: 132 MDTNGQANGLKSKKKENGDGKDNLWSAILEEVQNQGNTKLPSNKNVLVLGDNETGKTTLV 311
++ + AN + + D + +W +L + N V+VLGDN +GK++L+
Sbjct: 8 LEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTN----QGSTVIVLGDNRSGKSSLL 63
Query: 312 AKL-QGVEDPKKGSALEYAYIDVRDEYRD-----------------DHTRLSVWVLDGDP 437
++L + K S L Y + V+++ RD + ++ VW LDG+
Sbjct: 64 SRLDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSELLQIPVWSLDGNA 123
Query: 438 GHTNLLKFALSEETFPHTLVILTVAMTTPWGILXQLQSWASV 563
+LLK AL T + ILT ++ P ++ L+ WA+V
Sbjct: 124 ACASLLKHAL-PATPAEAIFILTASIDNP-NLIHSLKRWANV 163
>Z70307-15|CAA94342.2| 443|Caenorhabditis elegans Hypothetical
protein C39E9.14a protein.
Length = 443
Score = 47.2 bits (107), Expect = 2e-05
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Frame = +3
Query: 132 MDTNGQANGLKSKKKENGDGKDNLWSAILEEVQNQGNTKLPSNKNVLVLGDNETGKTTLV 311
++ + AN + + D + +W +L + N V+VLGDN +GK++L+
Sbjct: 8 LEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTN----QGSTVIVLGDNRSGKSSLL 63
Query: 312 AKL-QGVEDPKKGSALEYAYIDVRDEYRD-----------------DHTRLSVWVLDGDP 437
++L + K S L Y + V+++ RD + ++ VW LDG+
Sbjct: 64 SRLDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSELLQIPVWSLDGNA 123
Query: 438 GHTNLLKFALSEETFPHTLVILTVAMTTPWGILXQLQSWASV 563
+LLK AL T + ILT ++ P ++ L+ WA+V
Sbjct: 124 ACASLLKHAL-PATPAEAIFILTASIDNP-NLIHSLKRWANV 163
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +3
Query: 210 AILEEVQNQGNTKLPSNK-NVLVLGDNETGKTTLVAKLQ-GVEDPKKGSALEYAYI--DV 377
AI + Q + P +K V+VLGD+ GKT+++ + + G + + +++ DV
Sbjct: 35 AIRDHEQTIATSTAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDV 94
Query: 378 RDEYRD--DHTRLSVW 419
+YRD D RL VW
Sbjct: 95 GADYRDREDVVRLQVW 110
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 32.7 bits (71), Expect = 0.36
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 222 EVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYI-DVRDEYR-- 392
E+Q + + N +++ GD GKT L +LQG+ ++ A E + ++ YR
Sbjct: 31 ELQRKFARGVQYNLKIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRAT 90
Query: 393 DDHTRLSVW 419
DD ++ VW
Sbjct: 91 DDVVKVDVW 99
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 32.3 bits (70), Expect = 0.47
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +3
Query: 210 AILEEVQNQGNTKLPSNK-NVLVLGDNETGKTTLVAKLQ-GVEDPKKGSALEYAYI--DV 377
AI + Q + P +K V+VLGD+ GKT+++ + + G + + +++ DV
Sbjct: 35 AIRDHEQTIATSTAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDV 94
Query: 378 RDEYRD--DHTRLSVW 419
+YRD D RL +W
Sbjct: 95 GADYRDREDVVRLQMW 110
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
protein F54F3.1 protein.
Length = 1584
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 222 EVQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQG--VEDPKKGSALEYAYIDVRDEYRD 395
++Q N+ P K ++ L +N+ G + ++ G +EDPK A +Y Y + EY
Sbjct: 196 KIQTNVNSGGPDVKELVNLSNNQFGNF-FIFRVSGSAIEDPKDEGADDYDYNNYDQEYEG 254
Query: 396 DH 401
+H
Sbjct: 255 EH 256
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 240 NTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSA 353
N K+ + ++LG N GK+T + L GV P GSA
Sbjct: 619 NLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSA 656
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 225 VQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 356
V N N + S K V ++G + GK+TLV+ +Q P+ G L
Sbjct: 390 VINGINLSIESGKTVALVGPSGNGKSTLVSLIQQFYTPQSGRIL 433
>U46673-6|AAC48149.2| 1382|Caenorhabditis elegans P-glycoprotein
related protein 10 protein.
Length = 1382
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 246 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 356
K+ + + + ++G + +GK+TL A L DP KG+ L
Sbjct: 473 KVEAGEKIAIVGSSGSGKSTLTALLLRFYDPTKGAIL 509
>Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical protein
F31B12.2 protein.
Length = 1089
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 137 IHSSGILEDNNGTERLFRFRFFCRSYVTRDQNLKEFP 27
++ SG+ N T +LF F+ FC Y D FP
Sbjct: 958 VYCSGLARVYNRTTKLFLFKVFCLFYDISDSCFNRFP 994
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 225 VQNQGNTKLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 356
V N+ N + K + ++G + GK+TLV+ +Q P+ G L
Sbjct: 566 VLNKINLSIDPGKTIALVGPSGNGKSTLVSLIQQFYTPQSGRIL 609
>AF078790-7|AAC26936.1| 272|Caenorhabditis elegans Hypothetical
protein F36H12.14 protein.
Length = 272
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +1
Query: 52 RVTYERQKKRKRKS-LSVPLLSSK-IPEEWIQMA--RLTGLNQKRKRTETAK 195
++ R++K +RKS S P+L SK + E W +A R T + KR E AK
Sbjct: 135 KIQETRKRKMRRKSETSEPILKSKKMDENWSGVATERFTWFKGQTKRPENAK 186
>U23513-6|AAB36864.1| 1168|Caenorhabditis elegans Hypothetical
protein D2021.1 protein.
Length = 1168
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 396 DHTRLSVWVLDGDPGHTNLLKFA-LSEETFPHTL 494
DH W DP +T + K+A E+F HTL
Sbjct: 779 DHASQQTWQCVSDPSYTTVNKYAEYQSESFKHTL 812
>Z81091-5|CAB03142.1| 768|Caenorhabditis elegans Hypothetical
protein F55H12.1 protein.
Length = 768
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 639 HXWTXAFYFVTCVQVXNLIGLYGLQVQKPSFGAGXVYPMVW 517
+ WT + FVT V ++GL+ + + P G G +YP V+
Sbjct: 616 YFWTLIWKFVTPVCSLLMMGLWIWEKKYPHKGDGKIYPPVF 656
>U97407-4|AAB52482.3| 1272|Caenorhabditis elegans P-glycoprotein
related protein 2 protein.
Length = 1272
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 246 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 356
+L + + ++G + GK+T+V LQ DP KG L
Sbjct: 423 ELKAGDKIALVGSSGCGKSTIVNLLQRFYDPTKGRVL 459
>EF205592-1|ABM92304.1| 1272|Caenorhabditis elegans ABC transporter
PGP-2 protein.
Length = 1272
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 246 KLPSNKNVLVLGDNETGKTTLVAKLQGVEDPKKGSAL 356
+L + + ++G + GK+T+V LQ DP KG L
Sbjct: 423 ELKAGDKIALVGSSGCGKSTIVNLLQRFYDPTKGRVL 459
>AF038614-7|AAB92060.2| 664|Caenorhabditis elegans Hypothetical
protein F15E6.9 protein.
Length = 664
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 21/25 (84%)
Frame = +3
Query: 249 LPSNKNVLVLGDNETGKTTLVAKLQ 323
L S+K++L++GD TGKT+++ ++Q
Sbjct: 273 LKSHKSILLVGDYCTGKTSILHRIQ 297
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 249 LPSNKNVLVLGDNETGKTTLV 311
LP NK +L+ GD+ GKT+L+
Sbjct: 404 LPRNKTLLITGDSGIGKTSLM 424
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 249 LPSNKNVLVLGDNETGKTTLV 311
LP NK +L+ GD+ GKT+L+
Sbjct: 432 LPRNKTLLITGDSGIGKTSLM 452
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 249 LPSNKNVLVLGDNETGKTTLV 311
LP NK +L+ GD+ GKT+L+
Sbjct: 404 LPRNKTLLITGDSGIGKTSLM 424
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,478,896
Number of Sequences: 27780
Number of extensions: 331315
Number of successful extensions: 936
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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