Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_D19
(882 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.70
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.70
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.70
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 25 0.92
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.6
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 24 2.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 2.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.5
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 8.6
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 22 8.6
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 8.6
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 22 8.6
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.4 bits (53), Expect = 0.70
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 49 SRVTYERQKKRKRKSLSVPLLSSKIPEEWIQMARLTGLNQKRKRTETAKIIYGLLY*KKS 228
SR Y R ++R++KS K E W + +R +R+R+ KII L
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRETWKERSR---DRTERERSREPKIISSL---SNK 88
Query: 229 RIKGTQNYR 255
I NY+
Sbjct: 89 TIHNNNNYK 97
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.4 bits (53), Expect = 0.70
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 49 SRVTYERQKKRKRKSLSVPLLSSKIPEEWIQMARLTGLNQKRKRTETAKIIYGLLY*KKS 228
SR Y R ++R++KS K E W + +R +R+R+ KII L
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRETWKERSR---DRTERERSREPKIISSL---SNK 88
Query: 229 RIKGTQNYR 255
I NY+
Sbjct: 89 TIHNNNNYK 97
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.4 bits (53), Expect = 0.70
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 49 SRVTYERQKKRKRKSLSVPLLSSKIPEEWIQMARLTGLNQKRKRTETAKIIYGLLY*KKS 228
SR Y R ++R++KS K E W + +R +R+R+ KII L
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRETWKERSR---DRTERERSREPKIISSL---SNK 88
Query: 229 RIKGTQNYR 255
I NY+
Sbjct: 89 TIHNNNNYK 97
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 25.0 bits (52), Expect = 0.92
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 49 SRVTYERQKKRKRKSLSVPLLSSKIPEEWIQMARLTGLNQKRKRTETAKIIYGLLY*KKS 228
SR Y R ++R++KS K E W + +R +R+R+ KII L
Sbjct: 35 SRKRYSRSREREQKSYKNENSYRKYRETWKERSR---DRTERERSREPKIISSL---SNR 88
Query: 229 RIKGTQNYR 255
I NY+
Sbjct: 89 TIHNNNNYK 97
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 264 NVLVLGDNETGKTTLVAKLQGVEDPKKGSALEYAYIDVRDEYRDDHTR 407
N+ +G GK+T+V + GV+ + + LE D +D TR
Sbjct: 44 NIGTIGHVAHGKSTIVKAISGVQTVRFKNELERNITIKLDTRAEDSTR 91
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 23.8 bits (49), Expect = 2.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -1
Query: 420 PKH*AECDHRDIHL*HLYTHIRVQT 346
P H + CD + + + +L H+RV T
Sbjct: 37 PYHCSHCDRQFVQVANLRRHLRVHT 61
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -2
Query: 431 TIQHPNTEPSVIIAIFISNIYIRIF 357
T P TEPS + IS +I++F
Sbjct: 382 TTASPTTEPSTTTSTTISQKHIKVF 406
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 379 EMNIAMITLGSVFGCWMVIQVTLIYSSLRSVRKHSHTP*LY 501
+++ A+ LGS F C M + + + ++ + H TP Y
Sbjct: 317 QVSDAIPLLGSYFNCIMFMVASSVVLTVLVLNFHHRTPDRY 357
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 403 LGSVFGCWMVIQVTLI 450
LGS+FGC + +T+I
Sbjct: 131 LGSLFGCGSIWTMTMI 146
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 403 LGSVFGCWMVIQVTLI 450
LGS+FGC + +T+I
Sbjct: 97 LGSLFGCGSIWTMTMI 112
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 156 GLKSKKKENGDGKDNLWSAI 215
G + K N GKD LWS +
Sbjct: 85 GFLAWAKHNPRGKDALWSLV 104
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 21.8 bits (44), Expect = 8.6
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 403 LGSVFGCWMVIQVTLI 450
LGS+FGC + +T+I
Sbjct: 7 LGSLFGCGSIWTMTMI 22
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,486
Number of Sequences: 438
Number of extensions: 3971
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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