Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_D13
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0477 - 3688357-3690042                                           28   8.6  
06_01_0410 + 2928382-2930973                                           28   8.6  

>11_01_0477 - 3688357-3690042
          Length = 561

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
 Frame = +3

Query: 30  REFLKILRRLVLRPVDTNFKTFYLICTNNQGCRCFN-IGIRLFFIWKWI-------QKCN 185
           +E L +L+ +     D   + + L+C +N G R  + +G+ +     W+       + C+
Sbjct: 490 KEILALLQEIPELSRDDLLRAYSLLCYDNNGRRLSSLLGLPMSLRKPWLLMEIKASEACS 549

Query: 186 RCCGDRAPMSDV 221
            CC  RA M +V
Sbjct: 550 VCCACRADMQNV 561


>06_01_0410 + 2928382-2930973
          Length = 863

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 200 SGPDVRCRRFRPLTQEEVLQA 262
           SGPDV C R   L QE+V+Q+
Sbjct: 800 SGPDVGCHRKGGLAQEQVIQS 820


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,178,477
Number of Sequences: 37544
Number of extensions: 368286
Number of successful extensions: 761
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)