Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_D13
(879 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J03569-1|AAA35536.1| 529|Homo sapiens protein ( Human lymphocyt... 33 1.4
M21904-1|AAA35489.1| 529|Homo sapiens protein ( Human 4F2 glyco... 33 1.8
J02939-1|AAA52497.1| 529|Homo sapiens MDU1 protein. 33 1.8
J02769-1|AAA51540.1| 529|Homo sapiens H4F2 protein. 33 1.8
BC003000-1|AAH03000.2| 568|Homo sapiens solute carrier family 3... 33 1.8
BC001061-1|AAH01061.2| 630|Homo sapiens solute carrier family 3... 33 1.8
AB018010-1|BAA84649.1| 529|Homo sapiens 4F2 heavy chain protein. 33 1.8
BC131624-1|AAI31625.1| 609|Homo sapiens pogo transposable eleme... 31 5.5
AL008639-4|CAI23580.1| 609|Homo sapiens pogo transposable eleme... 31 5.5
AB040946-1|BAA96037.1| 649|Homo sapiens KIAA1513 protein protein. 31 5.5
>J03569-1|AAA35536.1| 529|Homo sapiens protein ( Human lymphocyte
activation antigen 4F2 large subunit mRNA, complete cds.
).
Length = 529
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 224 RFRPLTQEEVLQARQEVVWRRVQFCLIIMFW-AIIAMFLAIITCILMQSQCAEVVTNEMP 400
+F L++EE+L+ W R ++ L+++FW + M + I+ +C E+ +
Sbjct: 59 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCRELPAQKWW 118
Query: 401 SVPPVH 418
P++
Sbjct: 119 HTGPLY 124
>M21904-1|AAA35489.1| 529|Homo sapiens protein ( Human 4F2
glycosylated heavy chain (4F2HC) antigen gene, exon 9.
).
Length = 529
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 224 RFRPLTQEEVLQARQEVVWRRVQFCLIIMFW-AIIAMFLAIITCILMQSQCAEV 382
+F L++EE+L+ W R ++ L+++FW + M + I+ +C E+
Sbjct: 59 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCREL 112
>J02939-1|AAA52497.1| 529|Homo sapiens MDU1 protein.
Length = 529
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 224 RFRPLTQEEVLQARQEVVWRRVQFCLIIMFW-AIIAMFLAIITCILMQSQCAEV 382
+F L++EE+L+ W R ++ L+++FW + M + I+ +C E+
Sbjct: 59 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCREL 112
>J02769-1|AAA51540.1| 529|Homo sapiens H4F2 protein.
Length = 529
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 224 RFRPLTQEEVLQARQEVVWRRVQFCLIIMFW-AIIAMFLAIITCILMQSQCAEV 382
+F L++EE+L+ W R ++ L+++FW + M + I+ +C E+
Sbjct: 59 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCREL 112
>BC003000-1|AAH03000.2| 568|Homo sapiens solute carrier family 3
(activators of dibasic and neutral amino acid transport
protein.
Length = 568
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 224 RFRPLTQEEVLQARQEVVWRRVQFCLIIMFW-AIIAMFLAIITCILMQSQCAEV 382
+F L++EE+L+ W R ++ L+++FW + M + I+ +C E+
Sbjct: 98 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCREL 151
>BC001061-1|AAH01061.2| 630|Homo sapiens solute carrier family 3
(activators of dibasic and neutral amino acid transport
protein.
Length = 630
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 224 RFRPLTQEEVLQARQEVVWRRVQFCLIIMFW-AIIAMFLAIITCILMQSQCAEV 382
+F L++EE+L+ W R ++ L+++FW + M + I+ +C E+
Sbjct: 160 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCREL 213
>AB018010-1|BAA84649.1| 529|Homo sapiens 4F2 heavy chain protein.
Length = 529
Score = 32.7 bits (71), Expect = 1.8
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 224 RFRPLTQEEVLQARQEVVWRRVQFCLIIMFW-AIIAMFLAIITCILMQSQCAEV 382
+F L++EE+L+ W R ++ L+++FW + M + I+ +C E+
Sbjct: 59 KFTGLSKEELLKVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRCREL 112
>BC131624-1|AAI31625.1| 609|Homo sapiens pogo transposable element
with KRAB domain protein.
Length = 609
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 200 SGPDVRCRRFRPLTQEEVLQARQEVVWRR 286
SG ++RC R+ +T E+++Q EVVWRR
Sbjct: 429 SGMEIRCHRYGWMT-EDLMQDWLEVVWRR 456
>AL008639-4|CAI23580.1| 609|Homo sapiens pogo transposable element
with KRAB domain protein.
Length = 609
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 200 SGPDVRCRRFRPLTQEEVLQARQEVVWRR 286
SG ++RC R+ +T E+++Q EVVWRR
Sbjct: 429 SGMEIRCHRYGWMT-EDLMQDWLEVVWRR 456
>AB040946-1|BAA96037.1| 649|Homo sapiens KIAA1513 protein protein.
Length = 649
Score = 31.1 bits (67), Expect = 5.5
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 200 SGPDVRCRRFRPLTQEEVLQARQEVVWRR 286
SG ++RC R+ +T E+++Q EVVWRR
Sbjct: 469 SGMEIRCHRYGWMT-EDLMQDWLEVVWRR 496
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,313,731
Number of Sequences: 237096
Number of extensions: 1932698
Number of successful extensions: 3696
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3648
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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