Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_D11
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0559 + 4151054-4151178,4151306-4153018,4153121-4153412,415...    32   0.53 
08_01_0074 + 530207-532603                                             28   8.6  
08_01_0054 - 367770-370166                                             28   8.6  

>07_01_0559 +
           4151054-4151178,4151306-4153018,4153121-4153412,
           4154327-4154636,4155041-4155261
          Length = 886

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 313 LYDSGSCLEVEEYCRDSLLKGLSFKAVEPKGKIIGTMINGICPLXXXXXXNSLLNQALRC 492
           LYD+G C E  +   +S+    SF+A   K  ++    +G+ P        SLL  AL+C
Sbjct: 645 LYDTGHCEEALQKAEESISIQRSFEAFFLKAYVLAD--SGVDPSYSATVI-SLLEDALKC 701

Query: 493 PNPKFQR 513
           P+ + ++
Sbjct: 702 PSDRLRK 708


>08_01_0074 + 530207-532603
          Length = 798

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
 Frame = +1

Query: 325 GSCLEVEEYCRDSLLKGLSFKAVEPKGKIIGTMINGICPLXXXXXXNSLLNQ-ALRCPNP 501
           G CL+ +      LL+G+    V+P      T+ING C         SL  Q A +  NP
Sbjct: 495 GYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNP 554

Query: 502 K---FQRILHIL--ARREEGAK 552
               +  ILH L   RR   AK
Sbjct: 555 GIVIYSTILHGLFQTRRIAAAK 576


>08_01_0054 - 367770-370166
          Length = 798

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
 Frame = +1

Query: 325 GSCLEVEEYCRDSLLKGLSFKAVEPKGKIIGTMINGICPLXXXXXXNSLLNQ-ALRCPNP 501
           G CL  +      LL+G+    V+P      TMING C         SL  Q A +  NP
Sbjct: 527 GYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNP 586

Query: 502 ---KFQRILHIL--ARREEGAK 552
               +  IL  L  ARR   AK
Sbjct: 587 GIVTYSTILQGLFQARRTAAAK 608


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,935,199
Number of Sequences: 37544
Number of extensions: 413678
Number of successful extensions: 838
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)