Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_D11
         (882 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128826-1|BAC87627.1| 1350|Homo sapiens protein ( Homo sapiens ...    35   0.34 

>AK128826-1|BAC87627.1| 1350|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46270 fis, clone TESTI4028042, highly  similar
           to Homo sapiens NYD-SP11 protein (NYD-SP11). ).
          Length = 1350

 Score = 35.1 bits (77), Expect = 0.34
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
 Frame = +1

Query: 169 AEDSFNCSVMSKETTFTVLPITANDEEEIMDLLKRTFLIDEPLNEAVGLYDSGSCLEVEE 348
           +ED  NC ++  + +  V  + +  E+ +    KRTF + E L     +  +GS   +  
Sbjct: 28  SEDPKNCLIVLSDRSQAVAWMKSKTEDMVE---KRTFSMTERLPPIQSMVHAGSFHILVV 84

Query: 349 YCRDSLLK--GLSFKAVEPKGKI 411
           YC D +L+  G  F+A +P GK+
Sbjct: 85  YCGDLILRLFGDHFRAFKPLGKV 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,512,758
Number of Sequences: 237096
Number of extensions: 2128170
Number of successful extensions: 4354
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 4226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4346
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)