Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_D06
(883 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL353596-3|CAI17914.1| 632|Homo sapiens HBS1-like (S. cerevisia... 32 3.2
AJ459827-1|CAD30874.1| 632|Homo sapiens HBS1-like protein protein. 32 3.2
CR541746-1|CAG46546.1| 412|Homo sapiens SUV39H1 protein. 31 7.3
BC006238-1|AAH06238.1| 412|Homo sapiens suppressor of variegati... 31 7.3
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 31 7.3
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 31 7.3
AK223071-1|BAD96791.1| 412|Homo sapiens suppressor of variegati... 31 7.3
AF019968-1|AAB92224.1| 412|Homo sapiens Su(var)3-9 homolog prot... 31 7.3
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 30 9.7
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 30 9.7
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 30 9.7
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 30 9.7
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 30 9.7
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 30 9.7
>AL353596-3|CAI17914.1| 632|Homo sapiens HBS1-like (S. cerevisiae)
protein.
Length = 632
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 694 KSPTAIPQPVFDAKNQTQNNTSFINAIITKNETELKINTTQYNMTVTQKSPSSTS 858
K+P +P+PV D + T +++ + KN K N ++T+K P S S
Sbjct: 497 KNPDFVPKPVVDPSIAPSSRTKVLSSKLGKNSNFAKDNKKNNKGSLTRKPPFSLS 551
>AJ459827-1|CAD30874.1| 632|Homo sapiens HBS1-like protein protein.
Length = 632
Score = 31.9 bits (69), Expect = 3.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 694 KSPTAIPQPVFDAKNQTQNNTSFINAIITKNETELKINTTQYNMTVTQKSPSSTS 858
K+P +P+PV D + T +++ + KN K N ++T+K P S S
Sbjct: 497 KNPDFVPKPVVDPSIAPSSRTKVLSSKLGKNSNFAKDNKKNNKGSLTRKPPFSLS 551
>CR541746-1|CAG46546.1| 412|Homo sapiens SUV39H1 protein.
Length = 412
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 593 WTPRRSKPIYTRRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TR 772
W PR++ ++ E+ +RH+R H PSL +K K++ LR +
Sbjct: 74 WEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRHLDPSLANYLVQKAKQRRALRRWEQ 133
Query: 773 SLQKTKPSL 799
L + L
Sbjct: 134 ELNAKRSHL 142
>BC006238-1|AAH06238.1| 412|Homo sapiens suppressor of variegation
3-9 homolog 1 (Drosophila) protein.
Length = 412
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 593 WTPRRSKPIYTRRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TR 772
W PR++ ++ E+ +RH+R H PSL +K K++ LR +
Sbjct: 74 WEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRHLDPSLANYLVQKAKQRRALRRWEQ 133
Query: 773 SLQKTKPSL 799
L + L
Sbjct: 134 ELNAKRSHL 142
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 599 PRRSKPIYTRRHTTPRNPRSEITKRHYRRSRINHQQPSLNR 721
PRRS+PIY R PR P S ++R + RI P R
Sbjct: 298 PRRSEPIYNSR--CPRRPISSCSQRRGPKCRIEISSPCCPR 336
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 599 PRRSKPIYTRRHTTPRNPRSEITKRHYRRSRINHQQPSLNR 721
PRRS+PIY R PR P S ++R + RI P R
Sbjct: 298 PRRSEPIYNSR--CPRRPISSCSQRRGPKCRIEISSPCCPR 336
>AK223071-1|BAD96791.1| 412|Homo sapiens suppressor of variegation
3-9 homolog 1 variant protein.
Length = 412
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 593 WTPRRSKPIYTRRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TR 772
W PR++ ++ E+ +RH+R H PSL +K K++ LR +
Sbjct: 74 WEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRHLDPSLANYLVQKAKQRRALRRWEQ 133
Query: 773 SLQKTKPSL 799
L + L
Sbjct: 134 ELNAKRSHL 142
>AF019968-1|AAB92224.1| 412|Homo sapiens Su(var)3-9 homolog
protein.
Length = 412
Score = 30.7 bits (66), Expect = 7.3
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 593 WTPRRSKPIYTRRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TR 772
W PR++ ++ E+ +RH+R H PSL +K K++ LR +
Sbjct: 74 WEPRQNLKCVRILKQFHKDLERELLRRHHRSKTPRHLDPSLANYLVQKAKQRRALRRWEQ 133
Query: 773 SLQKTKPSL 799
L + L
Sbjct: 134 ELNAKRSHL 142
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 626 RRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TRSLQKTK 790
+ ++T R RS +R RRSR + P R RK+ R + R + +K K
Sbjct: 328 KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDK 382
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 626 RRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TRSLQKTK 790
+ ++T R RS +R RRSR + P R RK+ R + R + +K K
Sbjct: 176 KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDK 230
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 626 RRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TRSLQKTK 790
+ ++T R RS +R RRSR + P R RK+ R + R + +K K
Sbjct: 328 KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDK 382
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 626 RRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TRSLQKTK 790
+ ++T R RS +R RRSR + P R RK+ R + R + +K K
Sbjct: 268 KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDK 322
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 626 RRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TRSLQKTK 790
+ ++T R RS +R RRSR + P R RK+ R + R + +K K
Sbjct: 328 KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDK 382
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 30.3 bits (65), Expect = 9.7
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 626 RRHTTPRNPRSEITKRHYRRSRINHQQPSLNRCSTRKIKRKTTLRS*TRSLQKTK 790
+ ++T R RS +R RRSR + P R RK+ R + R + +K K
Sbjct: 328 KSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDK 382
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,835,118
Number of Sequences: 237096
Number of extensions: 1834082
Number of successful extensions: 4135
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4131
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11270645666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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