Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_D06
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z82076-2|CAB04938.1| 360|Caenorhabditis elegans Hypothetical pr... 30 1.9
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 30 2.5
Z71185-10|CAA94908.1| 273|Caenorhabditis elegans Hypothetical p... 29 3.3
Z70308-11|CAA94343.4| 378|Caenorhabditis elegans Hypothetical p... 29 4.4
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 4.4
AF022967-12|AAB69873.2| 467|Caenorhabditis elegans Hypothetical... 29 4.4
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 5.8
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 31.5 bits (68), Expect = 0.83
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +1
Query: 595 DASPLKTYLYTPTYNATQPTLRNNEKALSQKPNKSPTAIPQPVFDAKNQTQNNTSFINAI 774
DASP KT T T +A+ P N + A+ QK PT+ Q + + KN+ Q +T + +
Sbjct: 469 DASPPKT---TSTSSASPP---NPDPAMKQKYKFVPTSKKQKLTETKNKDQKSTINESPV 522
Query: 775 ITKNETE------LKINTTQYNMTVTQKSPSS 852
+N + K+ + N V K+P +
Sbjct: 523 ECQNSGQNEASNPTKLKDQELNKHVVPKNPEA 554
>Z82076-2|CAB04938.1| 360|Caenorhabditis elegans Hypothetical
protein W07G1.6 protein.
Length = 360
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 33 LKI*VLVSIAVCGSQCIYVVEILCFSLFYVTLSPIYSDAIV*HNFVCSIKY*PL 194
LK+ V V +C CI+V+ I + ++ L P Y D + F C + PL
Sbjct: 249 LKLAVFVFAVIC---CIFVLAISTMGILFLQLLPDYYDVAIMTIFECLVSLNPL 299
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 76 SVFTLWKFCVSRYFM*HFHRYIVTRLCNIISCALLNTNRLRVE 204
+ F +K CVSR +R V +C I+C L NT L ++
Sbjct: 104 TAFNFYKMCVSRNLTRGRNRSSVVAVCMYITCRLENTAHLLLD 146
>Z71185-10|CAA94908.1| 273|Caenorhabditis elegans Hypothetical
protein C35A5.6a protein.
Length = 273
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 652 TLRNNEKALSQKPNKSPTAIPQPVFDAKNQTQNNTSFINAIITKNETELKINTTQYNMT 828
T+ +N A +PT + Q N TQ+N F+ + + +K+NT + N T
Sbjct: 50 TISSNYNAFFAIMVTNPTVVQQVNQIEVNLTQSNPQFVKFVHNISHLHIKLNTVELNET 108
>Z70308-11|CAA94343.4| 378|Caenorhabditis elegans Hypothetical
protein F49E11.2 protein.
Length = 378
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 101 QNFHNVNTLTAANCNAHKYSNLK 33
+++H VN + A NC+ + Y N+K
Sbjct: 275 EDYHQVNRMIAINCDVYDYLNIK 297
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Frame = +1
Query: 598 ASPLKTYLYTPTYNATQPTLRNNEKALSQKPNKSPTAIPQPVFDA-------KNQTQNNT 756
AS T T T+ T T N + + P SPT P+P A KN + +
Sbjct: 295 ASTTTTTPSTSTHTTTV-TYSTNATSSTTSPTTSPTPEPEPTTTATVLAPTLKNLSDSGV 353
Query: 757 SFINAIITKNETELKINTTQYNMTVTQKSPSSTSLL 864
N NET L + N+ TQ + ST L+
Sbjct: 354 GINNVSTVLNET-LTYSEMGANLNATQVAEISTILI 388
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Frame = +1
Query: 598 ASPLKTYLYTPTYNATQPTLRNNEKALSQKPNKSPTAIPQPVFDA-------KNQTQNNT 756
AS T T T+ T T N + + P SPT P+P A KN + +
Sbjct: 277 ASTTTTTPSTSTHTTTV-TYSTNATSSTTSPTTSPTPEPEPTTTATVLAPTLKNLSDSGV 335
Query: 757 SFINAIITKNETELKINTTQYNMTVTQKSPSSTSLL 864
N NET L + N+ TQ + ST L+
Sbjct: 336 GINNVSTVLNET-LTYSEMGANLNATQVAEISTILI 370
>AF022967-12|AAB69873.2| 467|Caenorhabditis elegans Hypothetical
protein C13A2.1 protein.
Length = 467
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 592 LDASPLKTYLYTPTYNATQPTLRNNEKALSQKPNKSPT 705
L PLK ++Y+ Y T +L +N AL N PT
Sbjct: 48 LPVKPLKAFIYSAYYYPTSKSLGDNALALLMSINLPPT 85
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical protein
F26C11.3 protein.
Length = 1317
Score = 28.7 bits (61), Expect = 5.8
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +1
Query: 625 TPTYN----ATQPTLRNNEKALSQKP---NKSPTAIPQPVFD-AKNQTQNNTSFINAIIT 780
T TYN T TL + E LS+ T + Q +++ + N+T+ T+
Sbjct: 771 TTTYNWPTGGTTRTLPSGEIILSESLIAFQNCTTVLMQLIYNPSTNKTRTETTTDAEGCK 830
Query: 781 KNETELKINTTQYNMTVTQKSPSSTSL 861
K + KI+TT + T ++ +P+STS+
Sbjct: 831 KTSSTSKISTTPTSPTSSKPTPTSTSM 857
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,808,672
Number of Sequences: 27780
Number of extensions: 340297
Number of successful extensions: 1182
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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