Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_D04
(876 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 237 3e-61
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 93 6e-18
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 93 1e-17
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 85 2e-15
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 76 1e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 66 1e-09
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 65 2e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 4e-05
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 50 1e-04
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.083
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.083
UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;... 36 1.4
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 35 2.4
UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4; ... 35 3.1
UniRef50_Q4SK35 Cluster: Chromosome 2 SCAF14570, whole genome sh... 34 4.1
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 7.2
UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 237 bits (580), Expect = 3e-61
Identities = 111/123 (90%), Positives = 112/123 (91%)
Frame = +3
Query: 489 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 668
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 669 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSX 848
CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLS
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
Query: 849 PGK 857
K
Sbjct: 122 TRK 124
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +3
Query: 507 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 668
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 93.5 bits (222), Expect = 6e-18
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +3
Query: 513 RPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 680
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 320 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 418
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 92.7 bits (220), Expect = 1e-17
Identities = 46/74 (62%), Positives = 54/74 (72%)
Frame = -2
Query: 851 GXTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERRTGIR*A 672
G TQDDSYR RS RAERGVRA+SPAWSERP P+ DT SVSYEKAPRFPKG++ +
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV--- 65
Query: 671 AGSEQESARGSFQG 630
+G Q R + +G
Sbjct: 66 SGKRQGRNRRAHEG 79
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/40 (62%), Positives = 27/40 (67%)
Frame = -3
Query: 700 EKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 581
+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 85.0 bits (201), Expect = 2e-15
Identities = 47/92 (51%), Positives = 50/92 (54%)
Frame = +3
Query: 582 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 761
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 762 SFAPSWAVCTNPPFSPTAAPYPVTIVLSXPGK 857
SFAPSWAV NPPFSPTAAPYPVT+ LS K
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSPTRK 114
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +2
Query: 647 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 757
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 75.8 bits (178), Expect = 1e-12
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = -2
Query: 851 GXTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 750
G TQDDSYRIRRSGRAERGVRAHSPAWSERPTPN
Sbjct: 9 GWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/60 (66%), Positives = 41/60 (68%)
Frame = -3
Query: 562 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAAERP 383
MLVRGAEPMEKR + L V LL CS L LILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -2
Query: 857 FTGXTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN*DT 741
F G TQ +SYRIRRS RAERGV A+SPAWSERPTP+ DT
Sbjct: 7 FPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 296 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 454
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +3
Query: 456 ITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 635
I +R + + + P T F S PLT+ITKI Q + +T+ +YK T FPL
Sbjct: 44 IMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPL 103
Query: 636 EAPSCALLFRP 668
++PS +LLF P
Sbjct: 104 QSPSYSLLFPP 114
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 49.6 bits (113), Expect = 1e-04
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 785 VHEPPVQPDRCALSGNYRLES 847
+HEPPVQPDRCALSGNYRLES
Sbjct: 1 MHEPPVQPDRCALSGNYRLES 21
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 222 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 344
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 39.9 bits (89), Expect = 0.083
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 98 DPXMIXYIDEFGQTTTRMQ 154
DP MI YIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.083
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 366 ERGSGRAPNTQTASPRALADSLMQ 295
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6SWU5 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 212
Score = 35.9 bits (79), Expect = 1.4
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = -3
Query: 589 PLT*ASIFVMLVRGAEPMEKRQQRGL---FTVPGLLLAFCSHVLSCVITLILWITVLPPL 419
PLT AS+ + L+ P+ + + RGL T+ G ++A +S V L+L T+L PL
Sbjct: 50 PLTVASLIMFLIANLFPIVEIELRGLRSQTTLTGAVMALAGEGMSLVAMLVLATTLLFPL 109
Query: 418 SELIPL 401
+L+ L
Sbjct: 110 LQLLIL 115
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 35.1 bits (77), Expect = 2.4
Identities = 29/82 (35%), Positives = 36/82 (43%)
Frame = +3
Query: 582 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCR 761
+RG T Q D R P +CA RP R D C ++ WR HAVG
Sbjct: 638 LRGPATGQAVVDPGRMPRPV-TCA--GRPTRGLDLCGLATVSWVWRSTKCHAVG------ 688
Query: 762 SFAPSWAVCTNPPFSPTAAPYP 827
++P + CT P S APYP
Sbjct: 689 KYSPP-STCTRRPKSQRDAPYP 709
>UniRef50_A3N6N0 Cluster: Putative uncharacterized protein; n=4;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 668)
Length = 755
Score = 34.7 bits (76), Expect = 3.1
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -3
Query: 727 MRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKR 623
+R+R A RR GG+ G+R+GRNR+ + RG+R
Sbjct: 355 VRRRAAPRRRHGGEWRGRRRGRNRKRRQ--QRGQR 387
>UniRef50_Q4SK35 Cluster: Chromosome 2 SCAF14570, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14570, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 386
Score = 34.3 bits (75), Expect = 4.1
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = -2
Query: 674 AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKT---PATRPFYG 504
A GS+ E +R + PG + S +D SV + D + G K PA P +
Sbjct: 256 AGGSKPEESRSGSASDLPGGQEIPS---EADASVPYQDPQNDGQKPRKPRALPAAAPAHQ 312
Query: 503 SWPFAGLLLTCSFLRYHPDSVDNRITA 423
P A L TCS R H DS ++ + A
Sbjct: 313 ELPAAPKLTTCSSRRGHTDSRESDLWA 339
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.5 bits (73), Expect = 7.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -2
Query: 698 ERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 519
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 518 RPFYGSWP 495
P Y S P
Sbjct: 632 TPSYLSVP 639
>UniRef50_A3MA42 Cluster: Putative uncharacterized protein; n=1;
Acinetobacter baumannii ATCC 17978|Rep: Putative
uncharacterized protein - Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755)
Length = 183
Score = 33.1 bits (72), Expect = 9.5
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = -3
Query: 562 MLVRGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVITLILWITVLPPLSELIPLAAA 392
ML A+ + + ++ GL G+ L C H+++ + L ++P L ++I + A
Sbjct: 1 MLYTAAQTLSRGRKSGLMAAFGIFLGGCFHIIAASLGLTTIFQIIPKLYDIIKILGA 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,359,907
Number of Sequences: 1657284
Number of extensions: 17596894
Number of successful extensions: 53039
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 49735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52991
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 78292544701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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