Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_D02
         (894 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015533CB Cluster: PREDICTED: hypothetical protein;...    34   5.6  
UniRef50_UPI0000DA2C9C Cluster: PREDICTED: hypothetical protein;...    33   7.4  
UniRef50_UPI0000DA1B27 Cluster: PREDICTED: hypothetical protein;...    33   7.4  
UniRef50_Q6K6K1 Cluster: Putative uncharacterized protein P0047E...    33   7.4  
UniRef50_UPI0000DA3BB2 Cluster: PREDICTED: hypothetical protein;...    33   9.8  

>UniRef50_UPI00015533CB Cluster: PREDICTED: hypothetical protein;
           n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 304

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 19/38 (50%), Positives = 20/38 (52%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGRGSPFXXGXXGSXH 571
           KKK  KK KKKK KKK K    + R SP      GS H
Sbjct: 124 KKKKKKKKKKKKKKKKKKKKKKKERRSPL-WSAVGSDH 160


>UniRef50_UPI0000DA2C9C Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 128

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 16/25 (64%), Positives = 16/25 (64%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGR 532
           KKK  KK KKKK KKK K    RGR
Sbjct: 53  KKKKKKKKKKKKKKKKKKKEGGRGR 77



 Score = 33.1 bits (72), Expect = 9.8
 Identities = 16/26 (61%), Positives = 16/26 (61%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGRG 535
           KKK  KK KKKK KKK K     GRG
Sbjct: 51  KKKKKKKKKKKKKKKKKKKKKEGGRG 76


>UniRef50_UPI0000DA1B27 Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 229

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 16/26 (61%), Positives = 16/26 (61%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGRG 535
           KKK  KK KKKK KKK K     GRG
Sbjct: 203 KKKKKKKKKKKKKKKKKKKKQEAGRG 228


>UniRef50_Q6K6K1 Cluster: Putative uncharacterized protein
           P0047E05.22; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0047E05.22 - Oryza sativa subsp. japonica (Rice)
          Length = 236

 Score = 33.5 bits (73), Expect = 7.4
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGRG 535
           KKK  KK KKKK KKK K   S+G G
Sbjct: 119 KKKKKKKKKKKKKKKKKKKKSSQGTG 144


>UniRef50_UPI0000DA3BB2 Cluster: PREDICTED: hypothetical protein;
           n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 119

 Score = 33.1 bits (72), Expect = 9.8
 Identities = 16/26 (61%), Positives = 16/26 (61%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGRG 535
           KKK  KK KKKK KKK K   S  RG
Sbjct: 75  KKKKKKKKKKKKKKKKKKKKWSNNRG 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,086,782
Number of Sequences: 1657284
Number of extensions: 9545892
Number of successful extensions: 33831
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30415
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)