Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_D02
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC030525-1|AAH30525.1|   55|Homo sapiens Unknown (protein for MG...    32   2.4  
D88213-1|BAA19001.1|  729|Homo sapiens retina-specific amine oxi...    31   7.5  
DQ060035-1|AAY43129.1|  756|Homo sapiens amine oxidase, copper c...    31   7.5  
BC142641-1|AAI42642.1|  756|Homo sapiens amine oxidase, copper c...    31   7.5  
AF081363-1|AAD39345.1|  756|Homo sapiens retina copper-containin...    31   7.5  
AB012943-2|BAA32590.1|  756|Homo sapiens retina-specific amine o...    31   7.5  
AB012943-1|BAA32589.1|  729|Homo sapiens retina-specific amine o...    31   7.5  
BC003603-1|AAH03603.1|  575|Homo sapiens Unknown (protein for IM...    30   9.9  

>BC030525-1|AAH30525.1|   55|Homo sapiens Unknown (protein for
           MGC:40524) protein.
          Length = 55

 Score = 32.3 bits (70), Expect = 2.4
 Identities = 16/26 (61%), Positives = 16/26 (61%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGRG 535
           KKK  KK KKKK KKK K    R RG
Sbjct: 23  KKKKKKKKKKKKKKKKKKKRRRRRRG 48



 Score = 31.9 bits (69), Expect = 3.2
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGR 532
           KKK  KK KKKK KKK +    RGR
Sbjct: 25  KKKKKKKKKKKKKKKKKRRRRRRGR 49


>D88213-1|BAA19001.1|  729|Homo sapiens retina-specific amine
           oxidase protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 444 AHWNMHQVAILGHYHLELKEYHLEWFS 364
           AHW + QV  LGHY+ +L +   E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277


>DQ060035-1|AAY43129.1|  756|Homo sapiens amine oxidase, copper
           containing 2 (retina-specific) protein.
          Length = 756

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 444 AHWNMHQVAILGHYHLELKEYHLEWFS 364
           AHW + QV  LGHY+ +L +   E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277


>BC142641-1|AAI42642.1|  756|Homo sapiens amine oxidase, copper
           containing 2 (retina-specific) protein.
          Length = 756

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 444 AHWNMHQVAILGHYHLELKEYHLEWFS 364
           AHW + QV  LGHY+ +L +   E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277


>AF081363-1|AAD39345.1|  756|Homo sapiens retina copper-containing
           monoamine oxidase protein.
          Length = 756

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 444 AHWNMHQVAILGHYHLELKEYHLEWFS 364
           AHW + QV  LGHY+ +L +   E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277


>AB012943-2|BAA32590.1|  756|Homo sapiens retina-specific amine
           oxidase protein.
          Length = 756

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 444 AHWNMHQVAILGHYHLELKEYHLEWFS 364
           AHW + QV  LGHY+ +L +   E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277


>AB012943-1|BAA32589.1|  729|Homo sapiens retina-specific amine
           oxidase protein.
          Length = 729

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 444 AHWNMHQVAILGHYHLELKEYHLEWFS 364
           AHW + QV  LGHY+ +L +   E+ S
Sbjct: 251 AHWTVQQVFYLGHYYADLGQLEREFKS 277


>BC003603-1|AAH03603.1|  575|Homo sapiens Unknown (protein for
           IMAGE:3543897) protein.
          Length = 575

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 458 KKKXXKKXKKKKXKKKXKXXXSRGRGSP 541
           KKK  KK KKKK KKK K    + + +P
Sbjct: 547 KKKKKKKKKKKKKKKKKKKKKKKKKKTP 574


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,678,730
Number of Sequences: 237096
Number of extensions: 1598966
Number of successful extensions: 4741
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3988
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)