Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_D02
         (894 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92773-4|CAB07130.2|  584|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z82096-15|CAD45621.1|  397|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z82096-13|CAD45619.1|  381|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z81511-10|CAD45588.1|  397|Caenorhabditis elegans Hypothetical p...    29   5.9  
Z81511-8|CAD45586.1|  381|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81114-8|CAB97236.1|  584|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AJ011936-1|CAB41353.1|   66|Caenorhabditis elegans cyclic AMP-de...    28   7.8  

>Z92773-4|CAB07130.2|  584|Caenorhabditis elegans Hypothetical
           protein W08E3.2 protein.
          Length = 584

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 122 EESDGLPPASSSSIAAQEKPREELP 196
           EE  G+ PA    +  QEKPR++ P
Sbjct: 237 EEDQGVRPAQKRQVKQQEKPRKQKP 261


>Z82096-15|CAD45621.1|  397|Caenorhabditis elegans Hypothetical
           protein ZK909.2j protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = +3

Query: 243 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 422
           NA S  S G GGSA+R      N     N     +G L    T    +   ++D  Q W 
Sbjct: 3   NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62

Query: 423 PDAYSS 440
             A ++
Sbjct: 63  NPAQNT 68


>Z82096-13|CAD45619.1|  381|Caenorhabditis elegans Hypothetical
           protein ZK909.2h protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = +3

Query: 243 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 422
           NA S  S G GGSA+R      N     N     +G L    T    +   ++D  Q W 
Sbjct: 3   NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62

Query: 423 PDAYSS 440
             A ++
Sbjct: 63  NPAQNT 68


>Z81511-10|CAD45588.1|  397|Caenorhabditis elegans Hypothetical
           protein ZK909.2j protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = +3

Query: 243 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 422
           NA S  S G GGSA+R      N     N     +G L    T    +   ++D  Q W 
Sbjct: 3   NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62

Query: 423 PDAYSS 440
             A ++
Sbjct: 63  NPAQNT 68


>Z81511-8|CAD45586.1|  381|Caenorhabditis elegans Hypothetical
           protein ZK909.2h protein.
          Length = 381

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = +3

Query: 243 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 422
           NA S  S G GGSA+R      N     N     +G L    T    +   ++D  Q W 
Sbjct: 3   NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62

Query: 423 PDAYSS 440
             A ++
Sbjct: 63  NPAQNT 68


>Z81114-8|CAB97236.1|  584|Caenorhabditis elegans Hypothetical
           protein W08E3.2 protein.
          Length = 584

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 122 EESDGLPPASSSSIAAQEKPREELP 196
           EE  G+ PA    +  QEKPR++ P
Sbjct: 237 EEDQGVRPAQKRQVKQQEKPRKQKP 261


>AJ011936-1|CAB41353.1|   66|Caenorhabditis elegans cyclic
           AMP-dependent protein kinasecatalytic subunit protein.
          Length = 66

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/63 (30%), Positives = 24/63 (38%)
 Frame = +3

Query: 243 NALSSQSVGSGGSAKRKTALNKNQIPKTNVHSGGDGCLLLERTTLSGIPLIQDDNDQGWR 422
           NA S  S G GGSA+R      N     N     +G L    T    +   ++D  Q W 
Sbjct: 3   NAASGGSSGGGGSARRGNGGGNNGSDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWE 62

Query: 423 PDA 431
             A
Sbjct: 63  NPA 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,006,423
Number of Sequences: 27780
Number of extensions: 233406
Number of successful extensions: 657
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)