Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C24
         (967 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.84 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +1

Query: 532 PRXXXGGAXGXPP--XGGXFXGPPPGXGGPXG 621
           P    GG+ G  P   GG   GP PG GG  G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -2

Query: 294 PXXGGGGXXPTXXXXRGGXXXPPPTGGGXXGG 199
           P  GGGG         GG    P  GGG  GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 620 PXGPPXPGGGPXNXPP 573
           P  PP PGG   N PP
Sbjct: 530 PPPPPPPGGAVLNIPP 545



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = +2

Query: 203 PXXPPPVGGGXXXPPRXXXXVGXXPPPPXXG 295
           P   PP G G          +G  PPPP  G
Sbjct: 508 PNDGPPHGAGYDGRDLTGGPLGPPPPPPPGG 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,644
Number of Sequences: 2352
Number of extensions: 7059
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)