Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_C24
(967 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 37 0.025
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 37 0.025
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.53
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.53
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.53
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 31 0.93
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 31 0.93
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.2
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.6
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 1.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.6
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 30 2.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.1
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 3.7
U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 5.0
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 29 6.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.5
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 8.7
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 28 8.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 8.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 8.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 8.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 28 8.7
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 28 8.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 28 8.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 28 8.7
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 36.7 bits (81), Expect = 0.025
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 550 GAXGXPPXGGXFXGPPPGXGGPXG 621
G G PP G GPPPG GGP G
Sbjct: 187 GGQGGPPGHGGMGGPPPGQGGPGG 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 511 PPKIMRX---PRXXXGGAXGXPPXGGXFXGPP--PGXGGPXG 621
PP +M PR GG G PP G GPP G GGP G
Sbjct: 154 PPPLMGGGGDPRGPPGGMGG-PPGHGGMGGPPGHGGQGGPPG 194
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPX---GGXFXGPPPGXGGPXG 621
P P + P+ G PP GG GPP G GGP G
Sbjct: 133 PPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPG 176
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 550 GAXGXPPXGGXFXGPPPGXGGPXG 621
G G PP G G P G GGP G
Sbjct: 196 GGMGGPPPGQGGPGGPGGPGGPGG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.7 bits (81), Expect = 0.025
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 550 GAXGXPPXGGXFXGPPPGXGGPXG 621
G G PP G GPPPG GGP G
Sbjct: 467 GGQGGPPGHGGMGGPPPGQGGPGG 490
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +1
Query: 511 PPKIMRX---PRXXXGGAXGXPPXGGXFXGPP--PGXGGPXG 621
PP +M PR GG G PP G GPP G GGP G
Sbjct: 434 PPPLMGGGGDPRGPPGGMGG-PPGHGGMGGPPGHGGQGGPPG 474
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPX---GGXFXGPPPGXGGPXG 621
P P + P+ G PP GG GPP G GGP G
Sbjct: 413 PPPFGQPFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPG 456
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 550 GAXGXPPXGGXFXGPPPGXGGPXG 621
G G PP G G P G GGP G
Sbjct: 476 GGMGGPPPGQGGPGGPGGPGGPGG 499
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPPRXXXXVGXXPPPPXXG 295
PP PP+ GG PP PPPP G
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 620 PXG-PPXPGGGPXNXPPXGGXPXAPPXXXRG 531
P G PP GG P PP GG P PP G
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 215 PPVGGGXXXPPRXXXXVGXXPPPPXXG 295
PP+ GG PP G PPPP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPP---RXXXXVGXXPPPPXXG 295
PP PP+ GG PP G PPPP G
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 200 PPXXPPPVG-GGXXXPPRXXXXVGXXPPPPXXG 295
PP PPP G PP G PPPP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 620 PXGPPXPGG--GPXNXPPXGGXPXAPP 546
P PP PGG P PP GG PP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPPRXXXXVGXXPPPPXXG 295
PP PP+ GG PP PPPP G
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 620 PXG-PPXPGGGPXNXPPXGGXPXAPPXXXRG 531
P G PP GG P PP GG P PP G
Sbjct: 748 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 215 PPVGGGXXXPPRXXXXVGXXPPPPXXG 295
PP+ GG PP G PPPP G
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPG 733
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPP---RXXXXVGXXPPPPXXG 295
PP PP+ GG PP G PPPP G
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 200 PPXXPPPVG-GGXXXPPRXXXXVGXXPPPPXXG 295
PP PPP G PP G PPPP G
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 620 PXGPPXPGG--GPXNXPPXGGXPXAPP 546
P PP PGG P PP GG PP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPPRXXXXVGXXPPPPXXG 295
PP PP+ GG PP PPPP G
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 620 PXG-PPXPGGGPXNXPPXGGXPXAPPXXXRG 531
P G PP GG P PP GG P PP G
Sbjct: 331 PGGLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 215 PPVGGGXXXPPRXXXXVGXXPPPPXXG 295
PP+ GG PP G PPPP G
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPG 316
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPP---RXXXXVGXXPPPPXXG 295
PP PP+ GG PP G PPPP G
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +2
Query: 200 PPXXPPPVG-GGXXXPPRXXXXVGXXPPPPXXG 295
PP PPP G PP G PPPP G
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -3
Query: 620 PXGPPXPGG--GPXNXPPXGGXPXAPP 546
P PP PGG P PP GG PP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPPRXXXXVG-XXPPPPXXGW 298
PP P GGG PP VG PPPP G+
Sbjct: 36 PPACGNPCGGGFGPPPPPFGPVGYALPPPPPNGY 69
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 75 KKKXXKXKXKKKKKXKKXKXXKKKKXXXKXXXXKKXKXXK 194
KKK K + KK+KK K K KKK + KK K K
Sbjct: 195 KKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKKDKKDK 234
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 75 KKKXXKXKXKKK--KKXKKXKXXKK-KKXXXKXXXXKKXKXXK 194
KKK K K KKK KK KK K KK KK + KK K K
Sbjct: 211 KKKDEKKKDKKKEDKKDKKDKKDKKDKKDKKEKKDDKKSKKNK 253
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 212 PPPVGGGXXXPPRXXXXVGXXPPPPXXG 295
PPP G G PP G PPPP G
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMG 102
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPXGGXFXGPPPGXGGP 615
P P P I P GG PP G PPP G P
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPXGGXFXGPPPG 603
P P PP + P GG PP G PPPG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXPPXGG-XPXAPP 546
P GPP P G N P GG P PP
Sbjct: 188 PAGPPGPAGADGNTPSGGGEGPAGPP 213
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 547 GGAXGXPPXGGXFXGPPPGXGGPXG 621
GG G PP G F G P G GG G
Sbjct: 65 GGRTGSPPPFGGFSGAPQGFGGNQG 89
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 547 GGAXGXPPXGGXFXGPPPGXGGPXG 621
GG G PP G F G P G GG G
Sbjct: 123 GGRTGSPPPFGGFSGAPQGFGGNQG 147
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 212 PPPVGGGXXXPPRXXXXVGXXPPPP 286
PPP GG PPR G PPPP
Sbjct: 281 PPPPAGGSPPPPR----AGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 547 GGAXGXPPXGGXFXGPPPGXGGPXG 621
GG G PP G F G P G GG G
Sbjct: 86 GGRTGSPPPFGGFSGAPQGFGGNQG 110
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 547 GGAXGXPPXGGXFXGPPPGXGGPXG 621
GG G PP G F G P G GG G
Sbjct: 144 GGRTGSPPPFGGFSGAPQGFGGNQG 168
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 212 PPPVGGGXXXPPRXXXXVGXXPPPP 286
PPP GG PPR G PPPP
Sbjct: 302 PPPPAGGSPPPPR----AGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 547 GGAXGXPPXGGXFXGPPPGXGGPXG 621
GG G PP G F G P G GG G
Sbjct: 71 GGRTGSPPPFGGFSGAPQGFGGNQG 95
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 547 GGAXGXPPXGGXFXGPPPGXGGPXG 621
GG G PP G F G P G GG G
Sbjct: 129 GGRTGSPPPFGGFSGAPQGFGGNQG 153
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 212 PPPVGGGXXXPPRXXXXVGXXPPPP 286
PPP GG PPR G PPPP
Sbjct: 287 PPPPAGGSPPPPR----AGSPPPPP 307
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPXGGXFXGPPPG 603
P P PP + P GG PP G PPPG
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPXGGXFXGPPPGXGGPXG 621
P P PP + P GG PP G PPPG G G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG---MRPPPGAPGGGG 806
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPXGGXFXGPPPGXGGPXG 621
P P PP + P GG PP G PPPG G G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG---MRPPPGAPGGGG 806
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 75 KKKXXKXKXKKKKKXKKXKXXKKKK 149
KKK K + +KKKK KK K KK+K
Sbjct: 763 KKKKDKKEKEKKKKSKKSKKSKKEK 787
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3
Query: 75 KKKXXKXKXKKKKKXKKXKXXKKKKXXXK 161
KKK K K KKKK K K K+KK K
Sbjct: 764 KKKDKKEKEKKKKSKKSKKSKKEKKTKRK 792
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPXGGXFXGPPPGXGGPXG 621
P P PP + P GG PP G PPPG G G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG---MRPPPGAPGGGG 806
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 499 PXPXPPKIMRXPRXXXGGAXGXPPXGGXFXGPPPGXGGPXG 621
P P PP + P GG PP G PPPG G G
Sbjct: 769 PAPAPPGGRQAPMPPRGGPGAPPPPG---MRPPPGAPGGGG 806
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -3
Query: 620 PXGPPXPGGGPXN--XPPXGGXPXAP 549
P GPP P GGP N P G P AP
Sbjct: 203 PPGPPGPPGGPGNDGQPGGPGNPGAP 228
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPPRXXXXVGXXPPPP 286
PP PPP GGG PP PPPP
Sbjct: 40 PPPPPPPCGGGYEAPP--------PPPPP 60
>U61949-6|AAB03154.1| 166|Caenorhabditis elegans Hypothetical
protein F49E8.6 protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPPRXXXXVGXXPPPP 286
PP PP G PP G PPPP
Sbjct: 124 PPYCAPPPGPSSSAPPTLPTSSGNLPPPP 152
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXPPXG-GXPXAPP 546
P GPP P GG P G G P PP
Sbjct: 157 PKGPPGPPGGHGEPGPAGRGGPRGPP 182
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 75 KKKXXKXKXKKKKKXKKXKXXKKKKXXXKXXXXKKXKXXK 194
KKK K KK+K+ KK KKK KK K K
Sbjct: 44 KKKWTKTAQKKRKERKKADKAKKKTKKDAAKRKKKSKDKK 83
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 76 KKKXXKXXXKKKKKXKKXXXXKKRXXXXXXXXKKXXKXKR 195
KKK K KK+K+ KK KK+ KK K K+
Sbjct: 44 KKKWTKTAQKKRKERKKADKAKKKTKKDAAKRKKKSKDKK 83
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +2
Query: 200 PPXXPPPVGGGXXXPPRXXXXVGXXPPPP 286
PP P + G PP +G PPPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -3
Query: 620 PXGPPXPGG--GPXNXPPXGGXPXAP 549
P GPP PGG G P G P AP
Sbjct: 229 PPGPPGPGGPPGQDGHPGDAGAPGAP 254
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXPPXGGXPXAPP 546
P GPP P G P N P G P PP
Sbjct: 236 PPGPPGPPGPPGN--PGGIGPRGPP 258
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXP-PXGGXPXAPP 546
P GPP P G P + P G P PP
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPP 188
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXPPXG--GXPXAP 549
P G P P G P N P G G P AP
Sbjct: 135 PQGAPGPAGAPGNPGPQGPNGNPGAP 160
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXP-PXGGXPXAPP 546
P GPP P G P + P G P PP
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPP 188
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXP-PXGGXPXAPP 546
P GPP P G P + P G P PP
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPP 188
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = -3
Query: 620 PXGPPXPGGGPXNXP-PXGGXPXAPP 546
P GPP P G P + P G P PP
Sbjct: 163 PPGPPGPDGNPGSPAGPSGPGPAGPP 188
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -3
Query: 614 GPPXPGG-GPXNXPPXGGXP-XAPPXXXRG 531
GPP PGG G PP G P APP G
Sbjct: 434 GPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 8/37 (21%)
Frame = +2
Query: 200 PPXXPPPVG--------GGXXXPPRXXXXVGXXPPPP 286
PP PPP+G G PP G PPPP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 75 KKKXXKXKXKKKKKXKKXKXXKKKK 149
KKK K K K KKK K KKKK
Sbjct: 258 KKKNKKSKSKDKKKTASKKNKKKKK 282
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 8/37 (21%)
Frame = +2
Query: 200 PPXXPPPVG--------GGXXXPPRXXXXVGXXPPPP 286
PP PPP+G G PP G PPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 8/37 (21%)
Frame = +2
Query: 200 PPXXPPPVG--------GGXXXPPRXXXXVGXXPPPP 286
PP PPP+G G PP G PPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,643,694
Number of Sequences: 27780
Number of extensions: 235257
Number of successful extensions: 1999
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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