Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C23
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    31   7.3  
BC044581-1|AAH44581.1|  523|Homo sapiens PKD2L2 protein protein.       30   9.7  
AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens ...    30   9.7  
AF182034-1|AAF65622.1|  624|Homo sapiens polycystic kidney disea...    30   9.7  
AF118125-1|AAD46478.1|  609|Homo sapiens polycystin-2-like prote...    30   9.7  

>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
 Frame = +3

Query: 273 LQHLRYYVYSILFSTYSVNS-MYSNIL*F-YIYT*IHFLHLTYELFFKHSFEE*FMC*VN 446
           L+ L  Y+Y  ++    +   +Y  I  + YIY  I+F   TY   + + F   ++C   
Sbjct: 2   LEKLYVYIYMFMYIFIFIYIFIYIYIYVYVYIYLYIYFYIFTY--IYLYIFIYIYICLYI 59

Query: 447 YIMYHLIVF*HFLISAVGYILNS*FIFHFCQIMSYPIIFVFVISSYYI 590
           Y+  +L +F +  I    +I    FI+  C I  Y  I+VF+  + Y+
Sbjct: 60  YLYIYLYIFTYIYIYLHIFIYLHIFIY-IC-ICLYIFIYVFIYINIYM 105


>BC044581-1|AAH44581.1|  523|Homo sapiens PKD2L2 protein protein.
          Length = 523

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 309 IKYYIHNISSVAMNFCIFLFFFSYLNNYKLK 217
           + YY + I+S  + FCIFLF F+     K+K
Sbjct: 275 VSYYDYFIASCEITFCIFLFVFTTQEVKKIK 305


>AK128348-1|BAC87394.1|  129|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46490 fis, clone THYMU3027540. ).
          Length = 129

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 87  HLIXFHLYFILKVFHSYCCNFIKKTCIF--YFVSCFIYIFSVV*FTSVCNY 233
           H+  +H Y  + V+H++ C +I   C++  +   C  +I+  V    +C Y
Sbjct: 38  HMYVYHTY--MYVYHTHICMYITHICMYITHIYVCISHIYMYVYHAYMCMY 86


>AF182034-1|AAF65622.1|  624|Homo sapiens polycystic kidney
           disease-like 2 protein protein.
          Length = 624

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 309 IKYYIHNISSVAMNFCIFLFFFSYLNNYKLK 217
           + YY + I+S  + FCIFLF F+     K+K
Sbjct: 275 VSYYDYFIASCEITFCIFLFVFTTQEVKKIK 305


>AF118125-1|AAD46478.1|  609|Homo sapiens polycystin-2-like protein
           protein.
          Length = 609

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 309 IKYYIHNISSVAMNFCIFLFFFSYLNNYKLK 217
           + YY + I+S  + FCIFLF F+     K+K
Sbjct: 275 VSYYDYFIASCEITFCIFLFVFTTQEVKKIK 305


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,470,283
Number of Sequences: 237096
Number of extensions: 1860715
Number of successful extensions: 2840
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2839
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)