Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_C19
(1275 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.007
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.009
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.037
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.19
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.23
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 28 2.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.5
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 9.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.007
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +1
Query: 727 PPPPXXYXKXPPPXFPKXFXXGGPPPXXKKXPPPPPP 837
PPP PPP P GPPP PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPP-----PPPPPP 783
Score = 33.9 bits (74), Expect = 0.048
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 727 PPPPXXYXKXPPPXFPKXFXXGGPPPXXKKXPPPPPPP 840
PPPP P P P P P PPPPPPP
Sbjct: 732 PPPPPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPP 768
Score = 33.1 bits (72), Expect = 0.084
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 981 GGXPPPPPXXXXXXXXXPPPPP 916
GG PPPPP PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.3 bits (70), Expect = 0.15
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 984 GGGXPPPPPXXXXXXXXXPPPPP 916
GG PPPPP PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.9 bits (69), Expect = 0.19
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 730 PPPXXYXKXPPPXFPKXFXXGGPPPXXKKXPPPPPPP 840
PPP PPP P PP PPPPPPP
Sbjct: 752 PPPAPIMGGPPPPPP-------PPGVAGAGPPPPPPP 781
Score = 31.5 bits (68), Expect = 0.26
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 987 GGGGXPPPPPXXXXXXXXXPPPPP 916
GG PPPPP PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect(2) = 0.23
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 1184 PPXPPPPPPXXXXXG 1140
PP PPPPPP G
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 7.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 1179 PPPPPPPXXXXXGGG 1135
PPPPPPP GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 700 PXGGGXXXXPPPPXXYXKXPPPXFP 774
P GG PPPP PPP P
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.2 bits (55), Expect(2) = 0.30
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 1181 PXPPPPPPXXXXXGG 1137
P PPPPPP GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1187 PPPXPPPPP 1161
PPP PPPPP
Sbjct: 775 PPPPPPPPP 783
Score = 23.4 bits (48), Expect(2) = 0.23
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 1187 PPPXPPPP 1164
PPP PPPP
Sbjct: 761 PPPPPPPP 768
Score = 23.4 bits (48), Expect(2) = 0.30
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 1184 PPXPPPPP 1161
PP PPPPP
Sbjct: 761 PPPPPPPP 768
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.009
Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 698 PPXGGGXXXXPPPPXXXXXNXPPXSQKXXGGGXP-PPXXKXXPPPPPPR 841
PP G G PP PP + G P PP + PPPPPPR
Sbjct: 325 PPIGNGSSNSSLPPP------PPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Score = 29.9 bits (64), Expect = 0.79
Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Frame = +1
Query: 751 KXPPPXFPKXFXXGGPP----PXXKKXPPPPPPP 840
+ PPP P G PP PPPPPPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 728 PPPPXXXXXNXPPXSQKXXGGGXPPPXXKXXPPPPPPR 841
PPPP PP P PPPPPPR
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLP-------PPPPPPR 344
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 811 KKXPPPPPPPXXXKKKK 861
KK PPPPPPP + K
Sbjct: 308 KKRPPPPPPPSRRNRGK 324
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +1
Query: 697 PPXGGGXXXXPPPPXXYXKXPPPXFPKXFXXGG--PPPXXKKXP---PPPPPP 840
PP P PP PPP P+ G PPP PP PPP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPP-PRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.3 bits (75), Expect = 0.037
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +1
Query: 757 PPPXFPKXFXXGGPPPXXKKXPPPPPPPXXXKKKKKK 867
PPP P F PP PPPPPPP KK+K K
Sbjct: 10 PPPPPPPGFE----PP---SQPPPPPPPGYVKKRKNK 39
Score = 30.7 bits (66), Expect = 0.45
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 981 GGXPPPPPXXXXXXXXXPPPPP 916
G PPPPP PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 29.9 bits (64), Expect = 0.79
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 984 GGGXPPPPPXXXXXXXXXPPPPP 916
G PPPPP PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.5 bits (63), Expect = 1.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 796 PPPXXKKXPPPPPPPXXXKKKKKKXFXP 879
PPP + PPPPP KK+K P
Sbjct: 14 PPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 987 GGGGXPPPPPXXXXXXXXXPPPPP 916
G PPPPP PPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 23.8 bits (49), Expect(2) = 1.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 1179 PPPPPPP 1159
PPPPPPP
Sbjct: 24 PPPPPPP 30
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 1185 PXPPPPPP 1162
P PPPPPP
Sbjct: 9 PPPPPPPP 16
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 857 FFXXXXGGGGGGGXFFXXGGGPPXXXFFGXXGGGXXXXXXGGGGXXFXPPPXG 699
F GGG GG GG PP FG GG GG F P G
Sbjct: 180 FHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 1185 PXPPPPPPPXXXXXGG 1138
P PPPPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 26.6 bits (56), Expect(2) = 0.23
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 1179 PPPPPPPXXXXXGGG 1135
PPPPPPP GG
Sbjct: 946 PPPPPPPPLVSAAGG 960
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1187 PPPXPPPPP 1161
PPP PPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 0.23
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 1185 PXPPPPPP 1162
P PPPPPP
Sbjct: 905 PTPPPPPP 912
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/51 (29%), Positives = 17/51 (33%)
Frame = +1
Query: 730 PPPXXYXKXPPPXFPKXFXXGGPPPXXKKXPPPPPPPXXXKKKKKKXFXPP 882
PPP Y P + PP PPP PP + F PP
Sbjct: 79 PPP--YTAEPEARYNSTIHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPPP 127
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 5.5
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = +1
Query: 727 PPPPXXYXKXPP--PXFPKXFXXGGPPPXXKKXPPPPPPP 840
PPPP PP P P PPP P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1
Query: 820 PPPPPPPXXXKKK 858
PPPPPPP +KK
Sbjct: 1096 PPPPPPPAEVEKK 1108
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 820 PPPPPPPXXXKKKK 861
PPPPPPP +KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1187 PPPXPPPPP 1161
PPP PPPPP
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1184 PPXPPPPPP 1158
PP PPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1187 PPPXPPPPP 1161
PPP PPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 1184 PPXPPPPPP 1158
PP PPPPPP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 1185 PXPPPPPPP 1159
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.152 0.519
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,098,643
Number of Sequences: 5004
Number of extensions: 52877
Number of successful extensions: 548
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 693525122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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