Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C17
         (871 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0282 - 16236659-16236728,16236822-16236889,16238212-162382...   129   3e-30
03_05_0166 - 21438681-21438750,21438832-21438899,21440260-214403...   129   3e-30
08_02_0728 + 20461724-20461758,20462227-20462298,20462792-204628...    66   3e-11
07_03_0281 - 16221526-16221624,16221935-16221986,16222071-162221...    36   0.032

>07_03_0282 -
           16236659-16236728,16236822-16236889,16238212-16238263,
           16238357-16238526,16238611-16238644,16239197-16239206,
           16239644-16239749
          Length = 169

 Score =  129 bits (311), Expect = 3e-30
 Identities = 60/77 (77%), Positives = 68/77 (88%)
 Frame = +2

Query: 374 RITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIPIIIRRYL 553
           R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+  KIP  IRRYL
Sbjct: 84  RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYL 143

Query: 554 PDHSYEDWSIDELIIID 604
           PD SYEDW +DELI+ D
Sbjct: 144 PDGSYEDWGVDELIVED 160


>03_05_0166 -
           21438681-21438750,21438832-21438899,21440260-21440311,
           21440405-21440574,21440652-21440685,21441991-21442025
          Length = 142

 Score =  129 bits (311), Expect = 3e-30
 Identities = 60/77 (77%), Positives = 68/77 (88%)
 Frame = +2

Query: 374 RITTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIPIIIRRYL 553
           R T++YMTKYERAR+LGTRALQI+M APVMVELEGETDPL+IAMKEL+  KIP  IRRYL
Sbjct: 57  RKTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYL 116

Query: 554 PDHSYEDWSIDELIIID 604
           PD SYEDW +DELI+ D
Sbjct: 117 PDGSYEDWGVDELIVED 133


>08_02_0728 +
           20461724-20461758,20462227-20462298,20462792-20462825,
           20462874-20463079,20463173-20463224,20463325-20463438,
           20463521-20463574,20464464-20464538,20464645-20464749
          Length = 248

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +2

Query: 380 TTRYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKHGKIP 532
           T++YMTKYERAR+L TRALQI+M APVMVELEG T PL++   E  +   P
Sbjct: 95  TSKYMTKYERARILSTRALQISMNAPVMVELEGGTYPLEVEALERVYTDCP 145


>07_03_0281 -
           16221526-16221624,16221935-16221986,16222071-16222165,
           16222347-16222398,16222483-16222611,16222748-16222812
          Length = 163

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 431 ALQIAMCAPVMVELEGETDPLQ 496
           ALQI+M A VMVEL+GETDPL+
Sbjct: 61  ALQISMNALVMVELDGETDPLE 82



 Score = 36.3 bits (80), Expect = 0.032
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = +2

Query: 431 ALQIAMCAPVMVELEGETDPLQ 496
           ALQI+M A VMVEL+GETDPL+
Sbjct: 110 ALQISMNALVMVELDGETDPLE 131


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,534,572
Number of Sequences: 37544
Number of extensions: 243261
Number of successful extensions: 506
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)