Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C12
         (986 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...    31   1.9  
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...    31   1.9  
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...    31   1.9  
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...    31   1.9  
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...    30   2.5  
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...    30   2.5  
05_05_0379 + 24518724-24518950,24519076-24519343,24519482-245196...    29   4.3  
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078     28   10.0 

>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 469 SLLIXNVVGARRSSWRVIXS 528
           S+   NV+GARR+SWR+I S
Sbjct: 30  SVAYKNVIGARRASWRIISS 49


>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 469 SLLIXNVVGARRSSWRVIXS 528
           S+   NV+GARR+SWR+I S
Sbjct: 53  SVAYKNVIGARRASWRIISS 72


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 469 SLLIXNVVGARRSSWRVIXS 528
           S+   NV+GARR+SWR+I S
Sbjct: 52  SVAYKNVIGARRASWRIISS 71


>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 469 SLLIXNVVGARRSSWRVIXS 528
           S+   NV+GARR+SWR+I S
Sbjct: 271 SVAYKNVIGARRASWRIISS 290


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 469 SLLIXNVVGARRSSWRVIXS 528
           S+   NV+GARR+SWR++ S
Sbjct: 57  SVAYKNVIGARRASWRIVSS 76


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +1

Query: 469 SLLIXNVVGARRSSWRVIXS 528
           S+   NV+GARR+SWR++ S
Sbjct: 47  SVAYKNVIGARRASWRIVSS 66


>05_05_0379 +
           24518724-24518950,24519076-24519343,24519482-24519616,
           24519795-24519860,24520073-24520138,24520294-24520350,
           24520767-24520919
          Length = 323

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
 Frame = +2

Query: 59  LHDEPEAAIXPLSYSRSS--EEAIXRRPRLLQKAPRGTXKTRKLTGKFSLICLEYIVQRK 232
           LHD  + A  P   +RSS    A  ++PR+   +P  T K RK      +  L+ +V   
Sbjct: 171 LHDHHQDAGSPSPATRSSPGSPAAAKKPRIEAPSPMPTFKVRKEKLGDRITALQQLVSPF 230

Query: 233 RKTD 244
            KTD
Sbjct: 231 GKTD 234


>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
          Length = 1034

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 152 APRGTXKTRKLTGKFSLICLEYIVQRKRKTDXVL 253
           A +GT +T K T K  ++C++Y V   RK   VL
Sbjct: 360 ALKGTQQTLKCTQKGLILCVDYSVMPFRKAGPVL 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,433,170
Number of Sequences: 37544
Number of extensions: 301045
Number of successful extensions: 524
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2881826040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)