Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C12
         (986 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...    54   2e-07
Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...    54   2e-07
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...    48   8e-06
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...    48   8e-06
AF039048-11|AAB94232.1|  421|Caenorhabditis elegans Hypothetical...    29   6.7  

>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 44/109 (40%), Positives = 48/109 (44%)
 Frame = +2

Query: 329 MSVDKEELVQRAKLXXXXXXXXXXXXXXKEVTETGVELSXEERNLLSVCL*XMS*VPDGH 508
           MS  KEELV RAKL              K+VTE G ELS EERNLLSV    +       
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60

Query: 509 HGVSXPQIEQQXRGFRKKTAXGKRI*GYSRNGAQRNSCYXVLGLLDKHL 655
             V    IEQ+  G  KK    K           R+ C  VL LLDK L
Sbjct: 61  WRV-ISSIEQKTEGSEKKQQMAKEY-REKVEKELRDICQDVLNLLDKFL 107


>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 44/109 (40%), Positives = 48/109 (44%)
 Frame = +2

Query: 329 MSVDKEELVQRAKLXXXXXXXXXXXXXXKEVTETGVELSXEERNLLSVCL*XMS*VPDGH 508
           MS  KEELV RAKL              K+VTE G ELS EERNLLSV    +       
Sbjct: 1   MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEERNLLSVAYKNVVGARRSS 60

Query: 509 HGVSXPQIEQQXRGFRKKTAXGKRI*GYSRNGAQRNSCYXVLGLLDKHL 655
             V    IEQ+  G  KK    K           R+ C  VL LLDK L
Sbjct: 61  WRV-ISSIEQKTEGSEKKQQMAKEY-REKVEKELRDICQDVLNLLDKFL 107


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score = 48.4 bits (110), Expect = 8e-06
 Identities = 42/109 (38%), Positives = 47/109 (43%)
 Frame = +2

Query: 329 MSVDKEELVQRAKLXXXXXXXXXXXXXXKEVTETGVELSXEERNLLSVCL*XMS*VPDGH 508
           MS   EELVQRAKL              K+VTE G ELS EERNLLSV    +       
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60

Query: 509 HGVSXPQIEQQXRGFRKKTAXGKRI*GYSRNGAQRNSCYXVLGLLDKHL 655
             V    IEQ+  G  KK    K            + C  VL LLD+ L
Sbjct: 61  WRV-ISSIEQKTEGSEKKQQLAKEY-RVKVEQELNDICQDVLKLLDEFL 107


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score = 48.4 bits (110), Expect = 8e-06
 Identities = 42/109 (38%), Positives = 47/109 (43%)
 Frame = +2

Query: 329 MSVDKEELVQRAKLXXXXXXXXXXXXXXKEVTETGVELSXEERNLLSVCL*XMS*VPDGH 508
           MS   EELVQRAKL              K+VTE G ELS EERNLLSV    +       
Sbjct: 1   MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEERNLLSVAYKNVVGARRSS 60

Query: 509 HGVSXPQIEQQXRGFRKKTAXGKRI*GYSRNGAQRNSCYXVLGLLDKHL 655
             V    IEQ+  G  KK    K            + C  VL LLD+ L
Sbjct: 61  WRV-ISSIEQKTEGSEKKQQLAKEY-RVKVEQELNDICQDVLKLLDEFL 107


>AF039048-11|AAB94232.1|  421|Caenorhabditis elegans Hypothetical
           protein F16B4.1 protein.
          Length = 421

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +3

Query: 441 LAXRRGTSFQFAYXQCRRCPTVIMACHXLKLNSK 542
           +   +G  + F    CR C      CH LK N +
Sbjct: 36  ICFEKGHGYHFGVFSCRACAAFFRRCHFLKENRR 69


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,014,247
Number of Sequences: 27780
Number of extensions: 245120
Number of successful extensions: 450
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2573710548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)