Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_C10
(943 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.033
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.077
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.10
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.72
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.72
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.7
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 26 8.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.033
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = +3
Query: 585 KXPPPPRGXXGXXLGPXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPPXTRGXXP 749
K PPPP + P P P P PP G PPPP PP G P
Sbjct: 730 KSPPPP---PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP------PPGVAGAGP 775
Score = 32.7 bits (71), Expect = 0.077
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +1
Query: 793 PXPXKXXPXXXXXSXPXXPPPPPXXXXSXXXXPPPP 900
P P P P PPPPP + PPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 693 PPPPXGXXXXPPXTRGXXPXXKXXXXQXGPPXXPXTPXXXPXXXXXXXPXXPPPPP 860
PPPP P P GPP P P P PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP----PPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.95
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPXPXPPP 650
PPPP G G P P PPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +1
Query: 745 PPGKXPFXXXXAXQXXPXPXKXXPXXXXXSXPXXPPPPPXXXXSXXXXPPPPXXXXXG 918
PP P P P P P PPPP PPPP G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP-PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 10/48 (20%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPXPXP----------PPXTPXPPXXXXGXXXPPPP 704
PPPP P P P PP P PP PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 642 PPPXTPXPPXXXXGXXXPPPP 704
PPP P P G PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 838 PXXPPPPPXXXXSXXXXPPPPXXXXXGXNPP 930
P PPP PPPP G PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPXPXPPPXTPXPPXXXXG 683
PPPP G G P PPP P PP G
Sbjct: 761 PPPPPPPPGVA-GAGPPPPP--PPPPAVSAG 788
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/40 (30%), Positives = 12/40 (30%)
Frame = +3
Query: 780 PPXXPXTPXXXPXXXXXXXPXXPPPPPXXXXLXXKXXPPP 899
P P P P PPPPP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 838 PXXPPPPPXXXXSXXXXPPPPXXXXXGXNPP 930
P P PP PPPP G PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.077
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 7/76 (9%)
Frame = +1
Query: 724 PPXPGGXPPGKXPFXXXXAXQXXPXPXKXXPXXXXXSXPXXP-------PPPPXXXXSXX 882
PP P GK P + P P S P P PPPP S
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 883 XXPPPPXXXXXGXNPP 930
PPP NPP
Sbjct: 374 RQPPPLSSSRAVSNPP 389
Score = 29.9 bits (64), Expect = 0.54
Identities = 27/117 (23%), Positives = 28/117 (23%), Gaps = 4/117 (3%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPXPXPPPX----TPXPPXXXXGXXXPPPPXGXXXXPPXTRGXXPXXK 758
PPPP G P PP P PP PPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 759 XXXXQXGPPXXPXTPXXXPXXXXXXXPXXPPPPPXXXXLXXKXXPPPXXXGGGXKPP 929
PP + P P P PP PP G PP
Sbjct: 397 GRSAPALPPLGNASRTSTP-----PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 29.9 bits (64), Expect = 0.54
Identities = 29/112 (25%), Positives = 29/112 (25%), Gaps = 10/112 (8%)
Frame = +3
Query: 594 PPPRGXXGXXLGPXPXPPPXTPX------PPXXXXGXXXPPPPXGXXXXPPXTRGXXPXX 755
PPP P P PPP P PP PP PP P
Sbjct: 376 PPPLSSSRAVSNP-PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS 434
Query: 756 KXXXXQXG----PPXXPXTPXXXPXXXXXXXPXXPPPPPXXXXLXXKXXPPP 899
G PP P P P P PP PP P P
Sbjct: 435 APPSLPMGAPAAPPLPPSAPIAPP--LPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 8.8
Identities = 19/79 (24%), Positives = 19/79 (24%)
Frame = +3
Query: 579 RXKXPPPPRGXXGXXLGPXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPPXTRGXXPXXK 758
R PP P P PP P P PP P PP G
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAA--PPLPPSAPIAPPLPAGMPAAPP 468
Query: 759 XXXXQXGPPXXPXTPXXXP 815
PP P P
Sbjct: 469 LPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/94 (24%), Positives = 26/94 (27%), Gaps = 4/94 (4%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPXPXPPPXTPXPPXXXXGXXXP-PPPXGXXXXPPXTRGXXPXXK--- 758
PP P+ G P P P P + P P P P G P + P K
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 759 XXXXQXGPPXXPXTPXXXPXXXXXXXPXXPPPPP 860
P P P P PP P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/95 (24%), Positives = 24/95 (25%), Gaps = 4/95 (4%)
Frame = +3
Query: 627 GPXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXP-PXTRGXXPXXKXXXXQXGPPXXPXTP 803
G P P P PP P P P P G P K P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 804 XXXPXXXXXXXPXXPP---PPPXXXXLXXKXXPPP 899
P P PP PP + PPP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPPXTRGXXP 749
PP P+ G + P P PP P P G PPP P + G P
Sbjct: 1179 PPVPKPAAG--VPPVP-PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPP 728
PP P+ +G P PPP + PP PP P PP
Sbjct: 1198 PPVPK----PSVGVPPVPPP-STAPPVPTPSAGLPPVPVPTAKAPP 1238
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.5 bits (63), Expect = 0.72
Identities = 28/80 (35%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Frame = -1
Query: 859 GGGGGXXGXXXXXXXGXFXGVXGXFGGPXXXKXXFXX-GXXPRVXGGXXIXPXG-GGGXX 686
GG GG G G G G FGG G P GG P G GGG
Sbjct: 191 GGFGGGSGGPPPGPGGF--GGFGGFGGEGHHHGGHGGFGGGP---GGFEGGPGGFGGGPG 245
Query: 685 XPXXXXGGXGVXGGGXGXGP 626
GG G GG G GP
Sbjct: 246 GFGGGLGGFGGGPGGFGGGP 265
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 667 GGXGVXGGGXGXGPKXXPXXPRGGGGFXXRXXXXXXXXXXXXXXXXXXGG*XXFWGXXGG 488
GG G GGG G GP P G GGF GG F G GG
Sbjct: 188 GGFGGFGGGSG-GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 676 GGGXGXXPPXGGXXGXPPXPGG 741
GGG G GG G PP PGG
Sbjct: 187 GGGFGGF--GGGSGGPPPGPGG 206
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -1
Query: 700 GGGXXXPXXXXGGXGVXGGGXGXGPKXXPXXPRGGG 593
GGG P GG G GG G G GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 29.5 bits (63), Expect = 0.72
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +1
Query: 481 FXXPLXPPKXPXXPPXXXPFFXPXPGGGGXXXPAXKXPPPP 603
+ P PPK P P P PG + PPPP
Sbjct: 102 YSQPSQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPP 142
Score = 27.1 bits (57), Expect = 3.8
Identities = 25/112 (22%), Positives = 31/112 (27%), Gaps = 1/112 (0%)
Frame = +3
Query: 585 KXPPPPRGXXGXXLG-PXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPPXTRGXXPXXKX 761
K PPPP+ G P T P P P ++ P +
Sbjct: 58 KLPPPPKHASQLRAGGSSTGSTPRTASPAVGNQDYSKPS-----YSQPSYSQPSQPPKEP 112
Query: 762 XXXQXGPPXXPXTPXXXPXXXXXXXPXXPPPPPXXXXLXXKXXPPPXXXGGG 917
G P P P P PPPP + + PPP G
Sbjct: 113 ALPSRGTPSLPSRPGSRPSVLNQEQV---PPPPVRPNVMSQMPPPPSYSSSG 161
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 630 PXPXPPPXTPXPPXXXXGXXXPPPPXG 710
P PPP P P PPPP G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 838 PXXPPPPPXXXXSXXXXPPPP 900
P PPPPP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 838 PXXPPPPPXXXXSXXXXPPPP 900
P PPPP S PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 780 PPXXPXTPXXXPXXXXXXXPXXPPPP 857
PP P P P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 837 PXXPPPPPXXXXLXXKXXPPPXXXGGGXK 923
P PPPPP PPP G K
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVK 34
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.8
Identities = 24/90 (26%), Positives = 24/90 (26%)
Frame = +3
Query: 630 PXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPPXTRGXXPXXKXXXXQXGPPXXPXTPXX 809
P P P PP PPP PP P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPP-SPASAPPIPSKAPPIPS----SLPPPAQPAAPVK 182
Query: 810 XPXXXXXXXPXXPPPPPXXXXLXXKXXPPP 899
P PP PP K PPP
Sbjct: 183 SPPSAPSLPSAVPPMPP-------KVPPPP 205
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +1
Query: 724 PPXPGGXPPGKXPFXXXXAXQXXPXPXKXXPXXXXXSXPXXPPPPPXXXXSXXXXPPPP 900
PP P PP P P P + P S P P P PPPP
Sbjct: 151 PPSPASAPP--IPSKAPPIPSSLPPPAQ--PAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 5.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 630 PXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPP 728
P P PPP + PP PP P G PP
Sbjct: 1705 PTPPPPPMSVPPP-----PSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/39 (33%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Frame = +3
Query: 591 PPPPRGXXGXXLGPX-PXPPPXTPXPPXXXXGXXXPPPP 704
PPPP P P PP P PP P P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/79 (24%), Positives = 20/79 (25%), Gaps = 2/79 (2%)
Frame = +3
Query: 630 PXPXPPPXTPXPPXXXXGXXXPPPPXGXXXXPPXT--RGXXPXXKXXXXQXGPPXXPXTP 803
P PP P PPPP PP + G P P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPP---PPPPAVEDQAADANEPDDYYSSGRAVSPEIP 224
Query: 804 XXXPXXXXXXXPXXPPPPP 860
P PPPPP
Sbjct: 225 PTYTPKQADPLPAPPPPPP 243
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 8.8
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = +3
Query: 579 RXKXPPPPRGXXGXXLGPXPXPPPXTPXPPXXXXGXXXPPPP 704
R PPP R PP T PP PPP
Sbjct: 5 RSAAPPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPP 46
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,430,779
Number of Sequences: 5004
Number of extensions: 39004
Number of successful extensions: 256
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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