Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_C09
(1073 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 95 1e-19
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 95 1e-19
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 87 3e-17
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 87 3e-17
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 80 2e-15
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 80 2e-15
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 80 2e-15
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 68 1e-11
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 68 1e-11
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 68 1e-11
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 58 1e-08
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 58 1e-08
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 56 3e-08
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 52 9e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 2e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 50 3e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 50 3e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 50 3e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 49 5e-06
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 3e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 46 4e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 46 5e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 46 5e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 46 5e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 46 5e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 46 5e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 46 5e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 46 6e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 6e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 6e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 6e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 45 8e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 45 8e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 1e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 44 2e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 3e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 3e-04
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 43 3e-04
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 43 3e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 4e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 4e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 42 6e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 42 6e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 42 6e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 42 0.001
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 41 0.002
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.002
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 40 0.002
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 40 0.002
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 0.003
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 0.003
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 40 0.004
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 40 0.004
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 40 0.004
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 40 0.004
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 40 0.004
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 39 0.005
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 39 0.005
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.021
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.021
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 36 0.066
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.087
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 35 0.087
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 35 0.087
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 35 0.11
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 33 0.26
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 33 0.26
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 33 0.46
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 32 0.81
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.81
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.81
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 32 0.81
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 31 1.4
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 5.7
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 5.7
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 94.7 bits (225), Expect = 1e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = +1
Query: 274 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESI 453
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 454 DKVMAAGEHTINXKKVDP 507
DKV+ EH ++ KK+DP
Sbjct: 100 DKVLNNREHELDGKKIDP 117
Score = 60.9 bits (141), Expect = 2e-09
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 469 AGEHTINXKKVD 504
H IN K V+
Sbjct: 194 IHFHEINGKMVE 205
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 94.7 bits (225), Expect = 1e-19
Identities = 40/78 (51%), Positives = 53/78 (67%)
Frame = +1
Query: 274 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESI 453
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 454 DKVMAAGEHTINXKKVDP 507
DKV+ EH ++ KK+DP
Sbjct: 100 DKVLNNREHELDGKKIDP 117
Score = 60.9 bits (141), Expect = 2e-09
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 469 AGEHTINXKKVD 504
H IN K V+
Sbjct: 194 IHFHEINGKMVE 205
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 86.6 bits (205), Expect = 3e-17
Identities = 46/112 (41%), Positives = 63/112 (56%)
Frame = +1
Query: 199 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 378
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 379 NVKTDPNTGRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVDPXNAXARHGK 534
VK D GRSRGFAF+ F E +AA E TI K V+ A +R K
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENK 110
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 463 MAAGEHTINXKKVDPXNA 516
+ + T ++ D A
Sbjct: 168 SSQTKQTFGTRECDVKKA 185
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 86.6 bits (205), Expect = 3e-17
Identities = 46/112 (41%), Positives = 63/112 (56%)
Frame = +1
Query: 199 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 378
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 379 NVKTDPNTGRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVDPXNAXARHGK 534
VK D GRSRGFAF+ F E +AA E TI K V+ A +R K
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENK 110
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 463 MAAGEHTINXKKVDPXNA 516
+ + T ++ D A
Sbjct: 168 SSQTKQTFGTRECDVKKA 185
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/104 (43%), Positives = 57/104 (54%)
Frame = +1
Query: 223 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 402
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 403 GRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVDPXNAXARHGK 534
RSRGF F+ F +D M H I+ K VDP A R K
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDK 104
Score = 48.4 bits (110), Expect = 9e-06
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 469 AGEHTINXKKVD 504
H +N + D
Sbjct: 174 QKSHMVNGHRCD 185
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/104 (43%), Positives = 57/104 (54%)
Frame = +1
Query: 223 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 402
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 403 GRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVDPXNAXARHGK 534
RSRGF F+ F +D M H I+ K VDP A R K
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDK 104
Score = 48.4 bits (110), Expect = 9e-06
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 469 AGEHTINXKKVD 504
H +N + D
Sbjct: 174 QKSHMVNGHRCD 185
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 80.2 bits (189), Expect = 2e-15
Identities = 45/104 (43%), Positives = 57/104 (54%)
Frame = +1
Query: 223 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 402
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 403 GRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVDPXNAXARHGK 534
RSRGF F+ F +D M H I+ K VDP A R K
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDK 104
Score = 48.4 bits (110), Expect = 9e-06
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 469 AGEHTINXKKVD 504
H +N + D
Sbjct: 174 QKSHMVNGHRCD 185
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 469 AGEHTINXKKVDPXNAXAR 525
H + K VD A R
Sbjct: 109 DRPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 469 AGEHTINXKKVDPXNAXAR 525
H + K VD A R
Sbjct: 129 DRPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 67.7 bits (158), Expect = 1e-11
Identities = 33/79 (41%), Positives = 45/79 (56%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 469 AGEHTINXKKVDPXNAXAR 525
H + K VD A R
Sbjct: 130 DRPHKLGGKTVDSKRAIPR 148
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +1
Query: 265 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAP 444
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 445 ESIDKVMAAGEHTINXKKVD 504
+ +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +1
Query: 337 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVDPXNA 516
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDP A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 517 XARHGK 534
R K
Sbjct: 61 VPRDDK 66
Score = 48.4 bits (110), Expect = 9e-06
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 469 AGEHTINXKKVD 504
H +N + D
Sbjct: 136 QKSHMVNGHRCD 147
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +1
Query: 337 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVDPXNA 516
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDP A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 517 XARHGK 534
R K
Sbjct: 61 VPRDDK 66
Score = 48.4 bits (110), Expect = 9e-06
Identities = 20/72 (27%), Positives = 38/72 (52%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 469 AGEHTINXKKVD 504
H +N + D
Sbjct: 136 QKSHMVNGHRCD 147
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 56.4 bits (130), Expect = 3e-08
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +1
Query: 244 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 417
+Q N+ G D K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 418 FAFIVFXAPESIDKVMAAGEHTINXKKVD 504
+ F+ S ++ I+ +K +
Sbjct: 78 YGFVTMKDRASAERACKDPNPIIDGRKAN 106
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 54.4 bits (125), Expect = 1e-07
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = +1
Query: 259 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFX 438
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 439 APESIDKVMAAGEHTINXKKV 501
ES+ + +K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 53.2 bits (122), Expect = 3e-07
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +1
Query: 211 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 390
+N N + SQ + E D + ++VG + + T +E+ HF G + + ++
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQC 111
Query: 391 DPNTGRSRGFAFIVFXAPESIDKVMAAGEHTINXK--KVDP 507
D +G +GFA++ F E + +A + + + KVDP
Sbjct: 112 DRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDP 152
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.6 bits (118), Expect = 9e-07
Identities = 28/73 (38%), Positives = 37/73 (50%)
Frame = +1
Query: 217 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDP 396
G GGG + + + L V LS TT+K+LRD FG +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 397 NTGRSRGFAFIVF 435
+G SRGF FI F
Sbjct: 112 PSGNSRGFGFIYF 124
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.8 bits (116), Expect = 2e-06
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +1
Query: 256 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 429
N AE P +D R LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 430 VF 435
+
Sbjct: 150 EY 151
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPES 450
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ + PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVF 435
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEF 255
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPES 450
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ + PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVF 435
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEF 255
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPES 450
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ + PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVF 435
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEF 255
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 5e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPE 447
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
L++G L + ++ L + F G + SI V D + S G+A++ F P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPE 447
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
L++G L + ++ L + F G + SI V D + S G+A++ F P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERAL 115
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 DRKLFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
D +FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ F S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 463 MAAGEHTINXKKVD 504
+A TI +K D
Sbjct: 303 LALSMETIKMEKRD 316
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 48.0 bits (109), Expect = 1e-05
Identities = 19/51 (37%), Positives = 35/51 (68%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY 86
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 3e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 259 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 435
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 436 XAPESIDKVMAA 471
+ E+ D + A
Sbjct: 150 ASFEASDTALEA 161
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 277 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESID 456
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 46.4 bits (105), Expect = 4e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 259 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 435
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 436 XAPESIDKVMAA 471
+ E+ D + A
Sbjct: 160 ASFEASDTALEA 171
Score = 37.9 bits (84), Expect = 0.012
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 277 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESID 456
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +1
Query: 250 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 423
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 424 FIVF-XAPESID--------KVMAAGEHTINXKKVDPXNAXAR 525
F+ F ++I+ KV+ H + K D N R
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +1
Query: 250 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 423
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 424 FIVF-XAPESID--------KVMAAGEHTINXKKVDPXNAXAR 525
F+ F ++I+ KV+ H + K D N R
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +1
Query: 250 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 423
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 424 FIVF-XAPESID--------KVMAAGEHTINXKKVDPXNAXAR 525
F+ F ++I+ KV+ H + K D N R
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +1
Query: 250 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 423
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 424 FIVF-XAPESID--------KVMAAGEHTINXKKVDPXNAXAR 525
F+ F ++I+ KV+ H + K D N R
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +1
Query: 250 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 423
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 424 FIVF-XAPESID--------KVMAAGEHTINXKKVDPXNAXAR 525
F+ F ++I+ KV+ H + K D N R
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 46.0 bits (104), Expect = 5e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +1
Query: 250 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 423
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 424 FIVF-XAPESID--------KVMAAGEHTINXKKVDPXNAXAR 525
F+ F ++I+ KV+ H + K D N R
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 45.6 bits (103), Expect = 6e-05
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +1
Query: 250 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 429
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 430 VFXAPE 447
F PE
Sbjct: 363 CFEKPE 368
Score = 35.5 bits (78), Expect = 0.066
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
L+VG L + + L + F A G + SI V D T S G+A++ F P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 349 FGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 45.6 bits (103), Expect = 6e-05
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +1
Query: 250 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 429
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 430 VFXAPE 447
F PE
Sbjct: 303 CFEKPE 308
Score = 35.5 bits (78), Expect = 0.066
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
L+VG L + + L + F A G + SI V D T S G+A++ F P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 349 FGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 45.6 bits (103), Expect = 6e-05
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +1
Query: 250 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 429
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 430 VFXAPE 447
F PE
Sbjct: 300 CFEKPE 305
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 349 FGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 45.6 bits (103), Expect = 6e-05
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +1
Query: 250 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 429
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 430 VFXAPE 447
F PE
Sbjct: 363 CFEKPE 368
Score = 35.5 bits (78), Expect = 0.066
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
L+VG L + + L + F A G + SI V D T S G+A++ F P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 349 FGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 8e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 45.2 bits (102), Expect = 8e-05
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESI 453
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 268 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPE 447
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 448 SIDK 459
K
Sbjct: 179 DAQK 182
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 45.2 bits (102), Expect = 8e-05
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESI 453
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 268 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPE 447
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 448 SIDK 459
K
Sbjct: 324 DAQK 327
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMA 468
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 80
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 90
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 193
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 161
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPES 450
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 472 GEHT-INXKKV 501
T N KK+
Sbjct: 63 SNQTFFNSKKL 73
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 250 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 429
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 430 VF 435
+
Sbjct: 170 KY 171
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 250 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 429
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 430 VF 435
+
Sbjct: 170 KY 171
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +1
Query: 277 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESID 456
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F + +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 457 KVMA 468
+ +A
Sbjct: 232 RAIA 235
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +1
Query: 274 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEF 53
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +1
Query: 274 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEF 53
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 178 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 348
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 349 FGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
F +G++E +++KT NT +AF++F +++D+ + A
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMF---QTVDQAIQA 224
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +1
Query: 289 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 381
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 178 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 348
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 349 FGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
F +G++E +++KT NT +AF++F +++D+ + A
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMF---QTVDQAIQA 224
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +1
Query: 289 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 381
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 43.2 bits (97), Expect = 3e-04
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 178 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 348
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165
Query: 349 FGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAA 471
F +G++E +++KT NT +AF++F +++D+ + A
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMF---QTVDQAIQA 201
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +1
Query: 289 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 381
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 228 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 223 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 402
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 403 GRSRGFAFIVF 435
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 223 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 402
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 403 GRSRGFAFIVF 435
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 122
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 463 M 465
+
Sbjct: 113 L 113
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 42.3 bits (95), Expect = 6e-04
Identities = 17/57 (29%), Positives = 34/57 (59%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 123
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.5 bits (93), Expect = 0.001
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 274 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 435
G D R +FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 40.7 bits (91), Expect = 0.002
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 463 M 465
+
Sbjct: 119 L 119
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +1
Query: 253 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 417
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 418 FAFIVFXAPESIDKVMA 468
+ F+ F ++ + +A
Sbjct: 178 YGFVSFPNKQNAENAIA 194
Score = 38.3 bits (85), Expect = 0.009
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINV 384
D+ ++VG +S +TTD +LRD F YG+I + +
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 241 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 417
D + ++ AP R + + FV + E T+ ++ D F YG+I++I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 418 FAFIVFXAPESIDKVMAAGEHT 483
+A + + + ++ + T
Sbjct: 98 YALVEYETQKEANEAIDQSNDT 119
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 307 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAAGEHTI 486
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 487 NXKKVD 504
+ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +1
Query: 307 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVMAAGEHTI 486
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 487 NXKKVD 504
+ ++
Sbjct: 68 GSRYIE 73
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 271 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPES 450
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 451 IDKVMAA 471
+K AA
Sbjct: 103 CEKARAA 109
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 271 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPES 450
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 451 IDKVMAA 471
+K AA
Sbjct: 103 CEKARAA 109
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +1
Query: 280 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 460 VMA 468
+A
Sbjct: 347 AIA 349
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +1
Query: 280 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 460 VMA 468
+A
Sbjct: 347 AIA 349
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +1
Query: 280 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 460 VMA 468
+A
Sbjct: 322 AIA 324
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +1
Query: 280 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 460 VMA 468
+A
Sbjct: 325 AIA 327
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 39.1 bits (87), Expect = 0.005
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +1
Query: 208 QLNGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESI 378
++ + ++ D +D S + D + L V G+ ++TTD+ + +F G +
Sbjct: 143 KVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFC 202
Query: 379 NVKTDPNTGRSRGFAFIVFXAPESIDKVMAAGEHTINXKKVD 504
+K + G S+GF F+ + +KV+A +H I+ ++ D
Sbjct: 203 EIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCD 243
Score = 38.3 bits (85), Expect = 0.009
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 274 GRDDDRKLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFXAP 444
GR ++FVG L+ + + +LR FG A IE+ V TD + RGFAF+ +
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSA 312
Query: 445 ESIDKVMAAGEHTINXKKV 501
E+ +++++ G T+N V
Sbjct: 313 EAAERIVSKGSLTVNGLSV 331
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 417
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
Score = 37.5 bits (83), Expect = 0.016
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Frame = +1
Query: 250 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 423
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 424 FIVF-XAPESID--------KVMAAGEHTINXKKVDPXNAXAR 525
F+ F ++I+ KV+ H + K D N R
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER 142
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.1 bits (82), Expect = 0.021
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 286 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKVM 465
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 466 AAGEH 480
A EH
Sbjct: 72 TACEH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.021
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYG 363
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 35.5 bits (78), Expect = 0.066
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Frame = +1
Query: 214 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI---- 378
+G+A +GG D D + A DDRK+ V +S + T +L+ F YG+I S
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
Query: 379 -NVKTD-----PNTGRSRGFAFIVFXAPESIDKVMAA 471
KT P R+ G A I F E D+ A
Sbjct: 146 EEKKTSVFGTLPKHSRNCGTATITFKKSEHADRAKNA 182
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.087
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.087
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.087
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 35.1 bits (77), Expect = 0.087
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 268 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIV 432
APG +D R +FV L + TT+ E+R A + SI N+ RGFA++V
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVV 638
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 35.1 bits (77), Expect = 0.087
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPE 447
L + L T +E+R F + GEIES + D TG+S G+ F+ + E
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREE 94
Score = 33.5 bits (73), Expect = 0.26
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESID 456
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 235 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 414
GG D +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 415 GFAFIVFXAPE 447
G+AF+ + E
Sbjct: 242 GYAFVTYCNKE 252
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.5 bits (73), Expect = 0.26
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAP 444
+ + +F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.26
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 414
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 415 GFAFIVFXAPESIDKVMAA-GEHTINXKKVDPXNAXAR-HGKIXXP 546
GF F+ P+ D+ A TI ++V+ A R H K P
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKP 185
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.26
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 414
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 415 GFAFIVFXAPESIDKVMAA-GEHTINXKKVDPXNAXAR-HGKIXXP 546
GF F+ P+ D+ A TI ++V+ A R H K P
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKP 185
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 33.1 bits (72), Expect = 0.35
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Frame = +1
Query: 295 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDKV 462
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 463 MAAGEHTINXKKVDPXNAXARHGKIXXPRTXXXKXSXMXXTXTTFLPVXFG 615
A E + N + R G+ R LPV G
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGEPQAKRAADNSNYVTPVPSVPILPVPDG 338
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.46
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +1
Query: 280 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESID 456
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 457 KVMAAG----EHTINXKKVD 504
+ ++ H N K+V+
Sbjct: 422 RAISGRFVQVNHAENNKRVE 441
Score = 29.5 bits (63), Expect = 4.3
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +1
Query: 289 RKLFVGGLSWETTDKELRDHFGAYGEI 369
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.81
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 283 DDRKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESIDK 459
+ ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 460 VM 465
++
Sbjct: 87 LL 88
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.81
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFXAPES 450
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 451 IDKVMAA 471
+ K+M+A
Sbjct: 266 VIKLMSA 272
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.81
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFXAPES 450
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 451 IDKVMAA 471
+ K+M+A
Sbjct: 266 VIKLMSA 272
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 31.9 bits (69), Expect = 0.81
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Frame = +1
Query: 292 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFXAPES 450
K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 451 IDKVMAA 471
+ K+M+A
Sbjct: 266 VIKLMSA 272
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Frame = +1
Query: 283 DDRKLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFI 429
++RK+++GG++ E + E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 430 VFXAPESIDKVMAA 471
+ + A
Sbjct: 384 TMRNKAGVKAIFEA 397
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Frame = +1
Query: 283 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVF 435
++R+++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ F
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTF 71
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 295 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFXAPESID 456
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAE 92
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 384 YINTLYFTVCSKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 226
Y NT TV +K + E + + PT K ++ SW +S V + + T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 29.1 bits (62), Expect = 5.7
Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Frame = +1
Query: 199 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 378
T+N + N GG + N P +L G + WE K+++D F +YG I+
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 379 N--VKTDPNTGRSRGFAFIVFXAPESI 453
DP R+R + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 298 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFXAPESIDKVM 465
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 169 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 294
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 5.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 169 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 294
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,124,402
Number of Sequences: 27780
Number of extensions: 336010
Number of successful extensions: 929
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2877115450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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