Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_C08
(954 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 50 4e-07
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.011
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.026
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 31 0.32
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 5.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 9.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 50.4 bits (115), Expect = 4e-07
Identities = 39/144 (27%), Positives = 41/144 (28%), Gaps = 1/144 (0%)
Frame = +3
Query: 522 PPPPRGGGGXXXXPPXXPXPXXPXXXXXGXXGPXXPXXGGXXXXPPXXGGPPAPPXXXXP 701
PP P+ G PP P P P P G P G PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEI--------PSIPAPSGAPPVPAPSGIPPVPKPSVAA 1101
Query: 702 XPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPPPRXXXXXPPXPPPXXXPP 881
P P PP P P P G P P+ PP P P PP
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVP-KPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 882 XXXPXXXXXXXXRXPLP-XGXPPV 950
P P P G PPV
Sbjct: 1161 VPKPSVAAPP---VPAPSSGIPPV 1181
Score = 46.8 bits (106), Expect = 4e-06
Identities = 38/144 (26%), Positives = 39/144 (27%), Gaps = 1/144 (0%)
Frame = +3
Query: 522 PPPPRGGGGXXXXPPXXPXPXXPXXXXXGXXGPXXPXXGGXXXXP-PXXGGPPAPPXXXX 698
PP P G P P P P P G P P PP P
Sbjct: 1083 PPVPAPSG---IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA 1139
Query: 699 PXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPPPRXXXXXPPXPPPXXXP 878
P P P PP P P G P P+ PP PPP P
Sbjct: 1140 P-PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Query: 879 PXXXPXXXXXXXXRXPLPXGXPPV 950
P P P P PPV
Sbjct: 1199 PVPKPSVGVPP---VPPPSTAPPV 1219
Score = 43.2 bits (97), Expect = 6e-05
Identities = 31/125 (24%), Positives = 33/125 (26%), Gaps = 1/125 (0%)
Frame = +3
Query: 522 PPPPRGGGGXXXXPPXXPXPXXPXXXXXGXXGPXXPXXGGXXXXP-PXXGGPPAPPXXXX 698
PP P+ PP P P P G P P PP P
Sbjct: 1102 PPVPKPS---VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA 1158
Query: 699 PXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPPPRXXXXXPPXPPPXXXP 878
P P PP P P P P P+ PP PPP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVPPPSTAP 1217
Query: 879 PXXXP 893
P P
Sbjct: 1218 PVPTP 1222
Score = 37.5 bits (83), Expect = 0.003
Identities = 31/121 (25%), Positives = 31/121 (25%), Gaps = 1/121 (0%)
Frame = +3
Query: 522 PPPPRGGGGXXXXPPXXPXPXXPXXXXXGXXGPXXPXXGGXXXXPPXXGGPPAPPXXXXP 701
PP P G P P P G P P G PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPS--GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV 1188
Query: 702 XPXXPPXXXXXXXXXXXXXPP-PPXXXPPXXPXXPXXGGXGPPPRXXXXXPPXPPPXXXP 878
P PP PP PP P P G P P PP P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAP--PVPTPSAGLPPVPVPTAKAPPVPAPSSEA 1246
Query: 879 P 881
P
Sbjct: 1247 P 1247
Score = 37.1 bits (82), Expect = 0.004
Identities = 28/103 (27%), Positives = 28/103 (27%), Gaps = 3/103 (2%)
Frame = +1
Query: 655 PXXXGGPRXPXXXXXPPXXPPPXXXRXXXXXXXPXPP--PPXXXXXXXPXXPXXGGXXPP 828
P P P P PPP P P PP P P PP
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 829 -PGXXXXXPXXPPXXXPPPXPXPXXXXXXXXXXPXPXGXPPSP 954
P P P PP P P P P G PP P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPV---PVPSGAPPVP 1143
Score = 35.5 bits (78), Expect = 0.011
Identities = 27/100 (27%), Positives = 27/100 (27%), Gaps = 2/100 (2%)
Frame = +3
Query: 657 PXXGGPPAP-PXXXXPXPXXPPXXXXXXXXXXXXXPPPPXXXPPXX-PXXPXXGGXGPPP 830
P PP P P P P PPP P P P G P P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 831 RXXXXXPPXPPPXXXPPXXXPXXXXXXXXRXPLPXGXPPV 950
P P PP P P P G PPV
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPP---VPAPSGAPPV 1123
Score = 34.3 bits (75), Expect = 0.026
Identities = 26/94 (27%), Positives = 26/94 (27%)
Frame = +1
Query: 673 PRXPXXXXXPPXXPPPXXXRXXXXXXXPXPPPPXXXXXXXPXXPXXGGXXPPPGXXXXXP 852
P P PP P P PP P P P G P P P
Sbjct: 1074 PSIPAPSGAPPV-PAPSGIPPVPKPSVAAPPVPKPSVAVPPV-PAPSGAPPVPKPSVAAP 1131
Query: 853 XXPPXXXPPPXPXPXXXXXXXXXXPXPXGXPPSP 954
P PP P P P P G PP P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPV---PAPSGAPPVP 1162
Score = 32.7 bits (71), Expect = 0.078
Identities = 30/126 (23%), Positives = 31/126 (24%), Gaps = 2/126 (1%)
Frame = +3
Query: 522 PPPPRGGGGXXXXPPXXPXPXXPXXXXXGXXGPXXPXXGGXXXXP-PXXGGPPAPPXXXX 698
PP P+ PP P P P G P P PP P
Sbjct: 1121 PPVPKPS---VAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Query: 699 PXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPPPRXXXXXPPXPPP-XXX 875
P P PP P P P P P PP P P
Sbjct: 1178 IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP-PVPTPSAGLPPVPVPTAKA 1236
Query: 876 PPXXXP 893
PP P
Sbjct: 1237 PPVPAP 1242
Score = 30.7 bits (66), Expect = 0.32
Identities = 29/124 (23%), Positives = 30/124 (24%), Gaps = 1/124 (0%)
Frame = +2
Query: 524 PPPPGGGGGXXXXPPXPPXXXPXXXXXXGXXAXXPXXRGXXXXPPXXGGAPGXPXXXXPX 703
PP P G P P P G P P GAP P
Sbjct: 1112 PPVPAPSGAPPV--PKPSVAAPPVPVPSGAPPV-PKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 704 PXXP-PXXXXAXXXXXXXXAPPPPXXAXXXXXXXPXXGXGXPPPXXPXXPPXXPPXXXPP 880
P P P PP P + P G PP P P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 881 PXXP 892
P
Sbjct: 1229 VPVP 1232
Score = 29.5 bits (63), Expect = 0.73
Identities = 23/89 (25%), Positives = 23/89 (25%), Gaps = 9/89 (10%)
Frame = +1
Query: 655 PXXXGGPRXPXXXXXPPXXP-----PPXXXRXXXXXXXPXP----PPPXXXXXXXPXXPX 807
P G P P P P PP P P PP P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 808 XGGXXPPPGXXXXXPXXPPXXXPPPXPXP 894
P P P PP PP P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.2 bits (55), Expect = 6.8
Identities = 23/93 (24%), Positives = 23/93 (24%), Gaps = 2/93 (2%)
Frame = +2
Query: 674 PGXPXXXXPXPXXPPXXXXAXXXXXXXXAPPPPXXAXXXXXXXPXXGXGXPPPXXPXXPP 853
P P P P A APP P G PP P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP-APS 1070
Query: 854 XXPPXXXPPPXXPXXPXXXXXP--XXPXXGAPP 946
P P P P P P APP
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 2/76 (2%)
Frame = +3
Query: 672 PPAPPXXXXPXPXX-PPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPP-PRXXXX 845
PP P P PP P P P PP P
Sbjct: 971 PPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSAD 1030
Query: 846 XPPXPPPXXXPPXXXP 893
PP P P PP P
Sbjct: 1031 APPIPVPSTAPPVPIP 1046
Score = 25.8 bits (54), Expect = 9.0
Identities = 19/90 (21%), Positives = 19/90 (21%)
Frame = +1
Query: 625 PPXXGXXXXXPXXXGGPRXPXXXXXPPXXPPPXXXRXXXXXXXPXPPPPXXXXXXXPXXP 804
P G P P P P P PP P P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 805 XXGGXXPPPGXXXXXPXXPPXXXPPPXPXP 894
P P P PP P P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/78 (30%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Frame = +3
Query: 654 PPXXGGPPAPPXXXXPXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPP-- 827
PP PP P P PP PP P PP P P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP--PAQPAAPVKSPPSA 187
Query: 828 PRXXXXXPPXPPPXXXPP 881
P PP PP PP
Sbjct: 188 PSLPSAVPPMPPKVPPPP 205
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.002
Identities = 35/143 (24%), Positives = 35/143 (24%), Gaps = 4/143 (2%)
Frame = +3
Query: 528 PPRGGGGXXXXPPXXPXPXXPXXXXXGXXGPXXPXXGGXXXXPPXXGGPPAPPXXXXPXP 707
PP G G P P P P G P PP PP P
Sbjct: 325 PPIGNGSSNSSLPPPPPP------------PRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 708 XXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXG----PPPRXXXXXPPXPPPXXX 875
P PPP P P G PP PP PP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP-SL 431
Query: 876 PPXXXPXXXXXXXXRXPLPXGXP 944
PP P PLP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAP 454
Score = 33.5 bits (73), Expect = 0.045
Identities = 32/163 (19%), Positives = 35/163 (21%), Gaps = 4/163 (2%)
Frame = +2
Query: 416 PPXGGGKXXXPXXXXPXXLXPXRGGAXXXXXXXXXXPPPPGGGGGXXXXPPXPPXXXPXX 595
PP G G P G+ PPPP PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 596 XXXXGXXAXXPXXRGXXXXPPXXGGA----PGXPXXXXPXPXXPPXXXXAXXXXXXXXAP 763
R PP + P P P PP + AP
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 764 PPPXXAXXXXXXXPXXGXGXPPPXXPXXPPXXPPXXXPPPXXP 892
P P P P P PP P P P
Sbjct: 445 AAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 32.7 bits (71), Expect = 0.078
Identities = 32/135 (23%), Positives = 32/135 (23%), Gaps = 10/135 (7%)
Frame = +3
Query: 492 RXPXXXXXXXPP-PPRGGGGXXXXPPXXPXPXXPXXXXXGXXG---PXXPXXGGXXXXPP 659
R P PP PP G P P P P P P
Sbjct: 244 RVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAA 303
Query: 660 XXGG---PPAPPXXXXPXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPPP 830
PP PP PP PPPP P G PPP
Sbjct: 304 LAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Query: 831 RXXXXXPP---XPPP 866
P PPP
Sbjct: 364 PPPRSAPSTGRQPPP 378
Score = 32.3 bits (70), Expect = 0.10
Identities = 36/152 (23%), Positives = 37/152 (24%), Gaps = 12/152 (7%)
Frame = +2
Query: 524 PPPPGGGGGXXXXPPX----PPXXXPXXXXXXGXXAXXPXXRGXXXXPPXXGGAPGXPXX 691
PPP G PP PP P G PP AP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP----APPPAIP 396
Query: 692 XXPXPXXPPXXXXAXXXXXXXXAPP------PPXXAXXXXXXXPXXGXGXPP--PXXPXX 847
P PP + PP PP P PP P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 848 PPXXPPXXXPPPXXPXXPXXXXXPXXPXXGAP 943
PP PP P P P P AP
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAP-APAPAAP 487
Score = 31.9 bits (69), Expect = 0.14
Identities = 40/177 (22%), Positives = 41/177 (23%), Gaps = 7/177 (3%)
Frame = +1
Query: 445 PPXXXSXXXXXXPXGGXXPXXXXXXXPPPP-GGGGGXXXXPPX----PPXPXXXXXXXXG 609
PP P G PPPP G PP PP P G
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 610 XXGXXPPXXGXXXXXPXXXGGPRXPXXXXXPPXXPPPXXXRXXXXXXXPXPPPPXXXXXX 789
PP P P P PP P P PP
Sbjct: 374 RQ--PPPLSSSRAVSNPPAPPPAIPGRSA--PALPP--LGNASRTSTPPVPTPPSLPPSA 427
Query: 790 XPXXPXXGGXXPPPGXXXXXPXXPPXXXPPP--XPXPXXXXXXXXXXPXPXGXPPSP 954
P P PP P PP P P P P PP+P
Sbjct: 428 PPSLPPSA----PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = +3
Query: 672 PPAPPXXXXPXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGGXGPPPRXXXXXP 851
PP PP P P P PPPP PP P G GPPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP---PP-----PGVAGAGPPP------P 778
Query: 852 PXPPP 866
P PPP
Sbjct: 779 PPPPP 783
Score = 33.1 bits (72), Expect = 0.059
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 762 PPPXXXP-PXXPXXPXXGGXGPPPRXXXXXPPXPPPXXXPP 881
P P P P P P GG PPP PPP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.55
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 523 PPPPGGGGGXXXXPPXPPXP 582
PPPP G G PP PP P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.97
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 5/53 (9%)
Frame = +2
Query: 758 APPPPXXAXXXXXXXPXXGXGXPPPXXPXXPPXXPP-----XXXPPPXXPXXP 901
+PPPP A P PP PP PP PPP P P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.97
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 525 PPPRGGGGXXXXPPXXPXPXXPXXXXXGXXGPXXPXXGGXXXXPPXXGGPPAPP 686
PPP P P P P G P P G PP PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPP 783
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 445 PPXXXSXXXXXXPXGGXXPXXXXXXXPPPPGGGGGXXXXPPXPPXP 582
PP P P PPPP G PP PP P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 5.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 522 PPPPRGGGGXXXXPPXXPXP 581
PPPP G G PP P P
Sbjct: 764 PPPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.011
Identities = 25/77 (32%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = -3
Query: 865 GGGXGGXXXXXRGGGPXPPXXGXXGXXG------GXXXGGGGXXXXXXXXXXXXXGGXXG 704
GGG GG G P P G G G G G GG GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 703 XGXXXXGGAGGPPXXGG 653
G G GGP GG
Sbjct: 247 FGGGLGGFGGGPGGFGG 263
Score = 30.3 bits (65), Expect = 0.42
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 581 GXGGXGGXXXXPPPPPGGGG 522
G GG GG PPP PGG G
Sbjct: 189 GFGGFGGGSGGPPPGPGGFG 208
Score = 29.9 bits (64), Expect = 0.55
Identities = 24/68 (35%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -3
Query: 949 TGGXPXGRGX-RXXXXXXXXGXXXGGXXX-GGGXGGXXXXXRG--GGPXPPXXGXXGXXG 782
+GG P G G G GG GGG GG G GGP G G G
Sbjct: 197 SGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGG 256
Query: 781 GXXXGGGG 758
G GGG
Sbjct: 257 GPGGFGGG 264
Score = 29.1 bits (62), Expect = 0.97
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -1
Query: 945 GGAPXXGXXGXXXXXGXXGXXGGG-XXXGGXXGGXXGXXGG-GXP 817
GG P G G G GGG GG GG G GG G P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -3
Query: 718 GGXXGXGXXXXGGAGGPPXXGGXXXXPPXXGXXGPXXPXXXXXGXXGXGXXGGXXXXPPP 539
GG G G GG+GGPP G G G G G GG
Sbjct: 188 GGFGGFG----GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 538 PRGGGG 521
P G GG
Sbjct: 244 PGGFGG 249
Score = 27.1 bits (57), Expect = 3.9
Identities = 22/79 (27%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Frame = -2
Query: 887 GXGGGXXXGGXXGXXXXXPGGGXXPPXXGXXGXXXXXXXGGG-GXGXXXXXXXRXXXGGG 711
G GG G G PG G G G GG G G GGG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 710 XXGGXXXXXGXRGPPXXXG 654
G G G P G
Sbjct: 244 PGGFGGGLGGFGGGPGGFG 262
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.026
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = -3
Query: 937 PXGRGXRXXXXXXXXGXXXGGXXXGGGXGGXXXXXRGG--GPXPPXXGXXGXXGGXXXGG 764
P RG R G G GGG GG RGG G G G GG G
Sbjct: 5 PGSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Query: 763 GG 758
GG
Sbjct: 65 GG 66
Score = 26.2 bits (55), Expect = 6.8
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -1
Query: 900 GXXGXXGGGXXXGGXXGGXXGXXGGGXPXPXXGXXXXXXXAXXGGGGA 757
G G GG G G G GGG G G GGA
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA 53
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 762 PPPXXXPPXXPXXPXXGGXGPPPRXXXXXPPXPPPXXXPP 881
PP PP P P G G P P PP PP
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPP 533
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 4/65 (6%)
Frame = +2
Query: 764 PPPXXAXXXXXXXPXXGXGXPPPXXPXXPPXXPPXXXPPP----XXPXXPXXXXXPXXPX 931
PP A P G P PP PP PP P P P P
Sbjct: 494 PPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPG 553
Query: 932 XGAPP 946
APP
Sbjct: 554 ATAPP 558
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 793 PXXPXXGGXXPPPGXXXXXPXXPPXXXPPPXP 888
P P PPP P PP PPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 824 PPPXXPXXPPXXPPXXXPPPXXPXXP 901
PPP PP PP PP P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +3
Query: 654 PPXXGGPPAPPXXXXPXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXP 794
PP APP P P PP PP PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 3/43 (6%)
Frame = +2
Query: 824 PPPXXPXXPPXXPPXXXPPPX---XPXXPXXXXXPXXPXXGAP 943
PP PP P PPP P P P P AP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 818 GXPPPXXPXXPPXXPPXXXPPPXXP 892
G PPP P P PP PPP P
Sbjct: 7 GNPPPPPPP-PGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 810 GGXGPPPRXXXXXPPXPPPXXXPP 881
G PPP PP PP PP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 812 GXGXPPPXXPXXPPXXPPXXXPPP 883
G PPP P P P PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 523 PPPPGGGGGXXXXPPXPPXP 582
PPPP G PP PP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/77 (24%), Positives = 19/77 (24%)
Frame = +3
Query: 636 GGXXXXPPXXGGPPAPPXXXXPXPXXPPXXXXXXXXXXXXXPPPPXXXPPXXPXXPXXGG 815
GG PP P P P P P P P P P
Sbjct: 1004 GGSQIVPP----PKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSS 1059
Query: 816 XGPPPRXXXXXPPXPPP 866
PP P PPP
Sbjct: 1060 RLPPVSATRPQIPQPPP 1076
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -2
Query: 572 GXGGXXXXPPPPPG 531
G GG PPPPPG
Sbjct: 282 GPGGAPLVPPPPPG 295
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.151 0.527
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,112,476
Number of Sequences: 5004
Number of extensions: 35808
Number of successful extensions: 317
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 487313384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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