Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C07
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    24   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   7.4  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   9.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.7  

>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 399 KKKPHYLKIDFNKWNDEDDES*RKIIHMI 485
           K  P  LK +  K ND+  E  RK+IH +
Sbjct: 60  KDIPDALKNECAKCNDKHKEGIRKVIHYL 88


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 518 WWSWAEGRKTF 550
           W SW EG K F
Sbjct: 384 WLSWEEGMKVF 394


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 351 GKEKTDGPFWPTLTKDKKKPHYLKIDFN 434
           G    DGP W  ++K+  + H++ I  N
Sbjct: 463 GSPNVDGPDWKPISKE--EIHFIDIGEN 488


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 351 GKEKTDGPFWPTLTKDKKKPHYLKIDFN 434
           G    DGP W  ++K+  + H++ I  N
Sbjct: 463 GSPNVDGPDWKPISKE--EIHFIDIGEN 488


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 351 GKEKTDGPFWPTLTKDKKKPHYLKIDFN 434
           G    DGP W  ++K+  + H++ I  N
Sbjct: 465 GSPNVDGPDWKPISKE--EIHFIDIGEN 490


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,220
Number of Sequences: 336
Number of extensions: 2458
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)