Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C07
         (886 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L24804-1|AAA18537.1|  160|Homo sapiens p23 protein.                    43   0.002
BC003005-1|AAH03005.1|  160|Homo sapiens prostaglandin E synthas...    43   0.002
BC019324-1|AAH19324.1|  525|Homo sapiens alanyl-tRNA synthetase ...    38   0.064
BC004172-1|AAH04172.1|  525|Homo sapiens alanyl-tRNA synthetase ...    38   0.064
BC058912-1|AAH58912.1|  362|Homo sapiens protein tyrosine phosph...    37   0.11 
BC047685-1|AAH47685.1|  362|Homo sapiens protein tyrosine phosph...    37   0.11 
BC035508-1|AAH35508.1|  361|Homo sapiens PTPLAD1 protein protein.      37   0.11 
AK074898-1|BAC11277.1|  362|Homo sapiens protein ( Homo sapiens ...    37   0.11 
AK027421-1|BAB55101.1|  362|Homo sapiens protein ( Homo sapiens ...    37   0.11 
AJ271091-1|CAB69070.1|  370|Homo sapiens B-ind1 protein protein.       37   0.11 

>L24804-1|AAA18537.1|  160|Homo sapiens p23 protein.
          Length = 160

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 369 GPFWPTLTKDKKKPHYLKIDFNKWNDEDDES*RKIIHMIS-SKCSRNFGG 515
           G  WP LTK++ K ++L +DFN W D +D+S   + +    S+   N GG
Sbjct: 83  GQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGG 132


>BC003005-1|AAH03005.1|  160|Homo sapiens prostaglandin E synthase 3
           (cytosolic) protein.
          Length = 160

 Score = 42.7 bits (96), Expect = 0.002
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 369 GPFWPTLTKDKKKPHYLKIDFNKWNDEDDES*RKIIHMIS-SKCSRNFGG 515
           G  WP LTK++ K ++L +DFN W D +D+S   + +    S+   N GG
Sbjct: 83  GQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGG 132


>BC019324-1|AAH19324.1|  525|Homo sapiens alanyl-tRNA synthetase
           domain containing 1 protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.064
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 378 WPTLTKDKKKPHYLKIDFNKWNDEDDES*RKIIHM 482
           WP LTK+  KP +L +DF+ W D + +   ++ H+
Sbjct: 69  WPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHV 103


>BC004172-1|AAH04172.1|  525|Homo sapiens alanyl-tRNA synthetase
           domain containing 1 protein.
          Length = 525

 Score = 37.5 bits (83), Expect = 0.064
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +3

Query: 378 WPTLTKDKKKPHYLKIDFNKWNDEDDES*RKIIHM 482
           WP LTK+  KP +L +DF+ W D + +   ++ H+
Sbjct: 69  WPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHV 103


>BC058912-1|AAH58912.1|  362|Homo sapiens protein tyrosine
           phosphatase-like A domain containing 1 protein.
          Length = 362

 Score = 36.7 bits (81), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 357 EKTDGPFWPTLTKDKKKPHYLKIDFNKWNDEDD 455
           +K    +W  LTK +K+P +L  DF++W DE D
Sbjct: 83  QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESD 115


>BC047685-1|AAH47685.1|  362|Homo sapiens protein tyrosine
           phosphatase-like A domain containing 1 protein.
          Length = 362

 Score = 36.7 bits (81), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 357 EKTDGPFWPTLTKDKKKPHYLKIDFNKWNDEDD 455
           +K    +W  LTK +K+P +L  DF++W DE D
Sbjct: 83  QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESD 115


>BC035508-1|AAH35508.1|  361|Homo sapiens PTPLAD1 protein protein.
          Length = 361

 Score = 36.7 bits (81), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 357 EKTDGPFWPTLTKDKKKPHYLKIDFNKWNDEDD 455
           +K    +W  LTK +K+P +L  DF++W DE D
Sbjct: 83  QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESD 115


>AK074898-1|BAC11277.1|  362|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90417 fis, clone NT2RP3000171, weakly similar to
           Mus musculus partial mRNA for B-IND1 protein (B-ind1
           gene). ).
          Length = 362

 Score = 36.7 bits (81), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 357 EKTDGPFWPTLTKDKKKPHYLKIDFNKWNDEDD 455
           +K    +W  LTK +K+P +L  DF++W DE D
Sbjct: 83  QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESD 115


>AK027421-1|BAB55101.1|  362|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14515 fis, clone NT2RM1000800, weakly similar to
           Mus musculus partial mRNA for B-IND1 protein. ).
          Length = 362

 Score = 36.7 bits (81), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 357 EKTDGPFWPTLTKDKKKPHYLKIDFNKWNDEDD 455
           +K    +W  LTK +K+P +L  DF++W DE D
Sbjct: 83  QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESD 115


>AJ271091-1|CAB69070.1|  370|Homo sapiens B-ind1 protein protein.
          Length = 370

 Score = 36.7 bits (81), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 357 EKTDGPFWPTLTKDKKKPHYLKIDFNKWNDEDD 455
           +K    +W  LTK +K+P +L  DF++W DE D
Sbjct: 83  QKKVSQWWERLTKQEKRPLFLAPDFDRWLDESD 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,708,307
Number of Sequences: 237096
Number of extensions: 1496461
Number of successful extensions: 4986
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4976
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)