Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C07
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   4.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   4.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.5  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 497 LQKLWWSWWSWAEGRKTF 550
           L   W S W W E RK +
Sbjct: 165 LSVFWGSAWQWNEERKQY 182


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 378 WPTLTKDKKKPHYLKI 425
           WP L  ++K  HYL I
Sbjct: 512 WPRLNPNEKSLHYLHI 527


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 378 WPTLTKDKKKPHYLKI 425
           WP L  ++K  HYL I
Sbjct: 512 WPRLNPNEKSLHYLHI 527


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 345 YYGKEKTDGPFWPTLTKDKKKPHYLKIDFNK 437
           Y GK   +   WP+ ++D  +P Y   D  K
Sbjct: 534 YLGKPTKEDSEWPSYSRD--EPKYFIFDAEK 562


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,347
Number of Sequences: 438
Number of extensions: 2775
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)