Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_C04
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048...    44   1e-04
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656...    44   1e-04
02_02_0196 + 7685933-7685961,7686086-7686284                           44   1e-04
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576...    44   1e-04
02_05_0868 + 32342967-32343915,32344389-32344447                       33   0.39 

>06_03_0409 -
           20503480-20503678,20504522-20504717,20504805-20504847,
           20505632-20505739,20505848-20505850
          Length = 182

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 49  KVGFPHRLTKEDAMKWFQQKYDG 117
           +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 149 RVGIQHRVTKEDAMKWFQVKYEG 171


>05_02_0095 +
           6564703-6564705,6564848-6564955,6565153-6565195,
           6565303-6565409,6566310-6566395,6566396-6566594
          Length = 181

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 49  KVGFPHRLTKEDAMKWFQQKYDG 117
           +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 148 RVGIQHRVTKEDAMKWFQVKYEG 170


>02_02_0196 + 7685933-7685961,7686086-7686284
          Length = 75

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 49  KVGFPHRLTKEDAMKWFQQKYDG 117
           +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 42  RVGIQHRVTKEDAMKWFQVKYEG 64


>01_01_0745 +
           5769150-5769152,5769268-5769375,5769812-5769854,
           5769945-5770140,5770836-5771034
          Length = 182

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +1

Query: 49  KVGFPHRLTKEDAMKWFQQKYDG 117
           +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 149 RVGIQHRVTKEDAMKWFQVKYEG 171


>02_05_0868 + 32342967-32343915,32344389-32344447
          Length = 335

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 678 PRCWRFSIGSAPXXRASQKSTLKSEVAKPDRTIKXPGRSPXEAPSCAP 821
           PR W    G AP   A  ++  +   A P R  + PG +P  +P+ AP
Sbjct: 78  PRRWLIYGGEAPPVAAPGRAFRQPAPAVPGRAFRQPGPAPAPSPAPAP 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,859,459
Number of Sequences: 37544
Number of extensions: 287438
Number of successful extensions: 714
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)