Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_C03
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, mem... 77 7e-14
BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, mem... 77 7e-14
BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, mem... 77 7e-14
BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, mem... 77 7e-14
AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene ... 77 7e-14
CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein. 77 1e-13
BC020667-1|AAH20667.1| 99|Homo sapiens HIG1 domain family, mem... 62 4e-09
AB038022-1|BAA90726.1| 99|Homo sapiens CLST 11240 protein prot... 62 4e-09
AB038021-1|BAA90725.1| 99|Homo sapiens CLST 11240 protein prot... 62 4e-09
BC007502-1|AAH07502.1| 106|Homo sapiens HIG1 domain family, mem... 48 6e-05
BC000587-1|AAH00587.1| 106|Homo sapiens Unknown (protein for MG... 48 6e-05
BC040890-1|AAH40890.1| 106|Homo sapiens HIGD2BP protein protein. 37 0.086
>BC070277-1|AAH70277.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 77.4 bits (182), Expect = 7e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 200 QTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGAL 379
Q L RK+KE+PF+ +GI G A V YG Y K RG S+ L+ RV AQG VVGA+
Sbjct: 16 QGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAM 75
Query: 380 TAGMMYTLYKNHFNKLK 430
T GM Y++Y+ + K K
Sbjct: 76 TVGMGYSMYREFWAKPK 92
>BC009594-1|AAH09594.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 77.4 bits (182), Expect = 7e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 200 QTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGAL 379
Q L RK+KE+PF+ +GI G A V YG Y K RG S+ L+ RV AQG VVGA+
Sbjct: 16 QGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAM 75
Query: 380 TAGMMYTLYKNHFNKLK 430
T GM Y++Y+ + K K
Sbjct: 76 TVGMGYSMYREFWAKPK 92
>BC009583-1|AAH09583.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 77.4 bits (182), Expect = 7e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 200 QTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGAL 379
Q L RK+KE+PF+ +GI G A V YG Y K RG S+ L+ RV AQG VVGA+
Sbjct: 16 QGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAM 75
Query: 380 TAGMMYTLYKNHFNKLK 430
T GM Y++Y+ + K K
Sbjct: 76 TVGMGYSMYREFWAKPK 92
>BC000601-1|AAH00601.1| 93|Homo sapiens HIG1 domain family, member
1A protein.
Length = 93
Score = 77.4 bits (182), Expect = 7e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 200 QTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGAL 379
Q L RK+KE+PF+ +GI G A V YG Y K RG S+ L+ RV AQG VVGA+
Sbjct: 16 QGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAM 75
Query: 380 TAGMMYTLYKNHFNKLK 430
T GM Y++Y+ + K K
Sbjct: 76 TVGMGYSMYREFWAKPK 92
>AF145385-1|AAD33954.1| 93|Homo sapiens hypoxia-inducbile gene 1
protein.
Length = 93
Score = 77.4 bits (182), Expect = 7e-14
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +2
Query: 200 QTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGAL 379
Q L RK+KE+PF+ +GI G A V YG Y K RG S+ L+ RV AQG VVGA+
Sbjct: 16 QGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAM 75
Query: 380 TAGMMYTLYKNHFNKLK 430
T GM Y++Y+ + K K
Sbjct: 76 TVGMGYSMYREFWAKPK 92
>CR457385-1|CAG33666.1| 93|Homo sapiens HIG1 protein.
Length = 93
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +2
Query: 200 QTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGAL 379
Q L RK+KE+PF+ +GI G A V YG Y K RG S+ L+ RV AQG VVGA+
Sbjct: 16 QGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVGAM 75
Query: 380 TAGMMYTLYKNHFNK 424
T GM Y++Y+ + K
Sbjct: 76 TVGMGYSMYREFWAK 90
>BC020667-1|AAH20667.1| 99|Homo sapiens HIG1 domain family, member
1B protein.
Length = 99
Score = 61.7 bits (143), Expect = 4e-09
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 203 TEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGALT 382
+E L RK++ESP + IG+ G + Y Y + RG+ S+ L+ RV AQ VGA+
Sbjct: 18 SEKLLRKTRESPLVPIGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACAVGAIM 77
Query: 383 AGMMYTLYKNHFNKL 427
G +YT+Y ++ ++
Sbjct: 78 LGAVYTMYSDYVKRM 92
>AB038022-1|BAA90726.1| 99|Homo sapiens CLST 11240 protein
protein.
Length = 99
Score = 61.7 bits (143), Expect = 4e-09
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 203 TEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGALT 382
+E L RK++ESP + IG+ G + Y Y + RG+ S+ L+ RV AQ VGA+
Sbjct: 18 SEKLLRKTRESPLVPIGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACAVGAIM 77
Query: 383 AGMMYTLYKNHFNKL 427
G +YT+Y ++ ++
Sbjct: 78 LGAVYTMYNDYVKRM 92
>AB038021-1|BAA90725.1| 99|Homo sapiens CLST 11240 protein
protein.
Length = 99
Score = 61.7 bits (143), Expect = 4e-09
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 203 TEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGALT 382
+E L RK++ESP + IG+ G + Y Y + RG+ S+ L+ RV AQ VGA+
Sbjct: 18 SEKLLRKTRESPLVPIGLGGCLVVAAYRIYRLRSRGSTKMSIHLIHTRVAAQACAVGAIM 77
Query: 383 AGMMYTLYKNHFNKL 427
G +YT+Y ++ ++
Sbjct: 78 LGAVYTMYSDYVKRM 92
>BC007502-1|AAH07502.1| 106|Homo sapiens HIG1 domain family, member
2A protein.
Length = 106
Score = 47.6 bits (108), Expect = 6e-05
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = +2
Query: 149 PXKMSQAQPIFDYHXASQTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSV 328
P + P + S E RK++E+P + IG A + YG Y++ RG S
Sbjct: 18 PPVIEGLSPTVYRNPESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSF-HRGNSQRSQ 76
Query: 329 FLMQFRVIAQGTVVGALTAGMMYTLYKN 412
+M+ R+ AQG V A+ G+ T K+
Sbjct: 77 LMMRTRIAAQGFTVAAILLGLAVTAMKS 104
>BC000587-1|AAH00587.1| 106|Homo sapiens Unknown (protein for
MGC:2198) protein.
Length = 106
Score = 47.6 bits (108), Expect = 6e-05
Identities = 27/88 (30%), Positives = 42/88 (47%)
Frame = +2
Query: 149 PXKMSQAQPIFDYHXASQTEXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSV 328
P + P + S E RK++E+P + IG A + YG Y++ RG S
Sbjct: 18 PPVIEGLSPTVYRNPESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSF-HRGNSQRSQ 76
Query: 329 FLMQFRVIAQGTVVGALTAGMMYTLYKN 412
+M+ R+ AQG V A+ G+ T K+
Sbjct: 77 LMMRTRIAAQGFTVAAILLGLAVTAMKS 104
>BC040890-1|AAH40890.1| 106|Homo sapiens HIGD2BP protein protein.
Length = 106
Score = 37.1 bits (82), Expect = 0.086
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 206 EXLARKSKESPFMVIGITGLVAXVGYGAYAYKRRGAMSTSVFLMQFRVIAQGTVVGALTA 385
E RK++E+P + IG A + G Y + +G S +M ++ AQG + A+
Sbjct: 37 EKFLRKTRENPVVPIGFLCTAAVLTNGLYCF-HQGNSQCSRLMMHTQIAAQGFTIAAILL 95
Query: 386 GMMYTLYKN 412
G+ T K+
Sbjct: 96 GLAATAMKS 104
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,664,031
Number of Sequences: 237096
Number of extensions: 1743403
Number of successful extensions: 2126
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2126
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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