BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_C01
(871 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein. 26 1.3
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 26 1.7
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 24 5.2
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 24 5.2
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 24 6.9
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 24 6.9
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 6.9
>DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein.
Length = 75
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 111 YIDEFGQTTTRMQ*KKCFICEICDAIALFVT 203
++D GQ T R + KCF C + + L T
Sbjct: 13 FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 473 SHVLSCVIPLILWITVLPPLSELIPLAA 390
S +LS V+ L+L +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 24.2 bits (50), Expect = 5.2
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 540 RPPDEHHKNRRSSQRWRNPT-GL*RYQAFPPGSSLVRSPVPTLPLTGYCPP 689
RP D + R Q T L R + GSS V PV T PL G PP
Sbjct: 312 RPSDNTYSEARDFQFIPLDTVDLRRKRQKLTGSSNVFLPVVTAPLPGPSPP 362
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 24.2 bits (50), Expect = 5.2
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 725 LTL*VSQFGVGRSLQA-GLCARTPRSAR 805
L L VS V R L A G CAR PR R
Sbjct: 13 LDLQVSAKTVSRRLHAAGFCARRPRKVR 40
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 23.8 bits (49), Expect = 6.9
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 725 LTL*VSQFGVGRSLQA-GLCARTPRSAR 805
L L VS V R L A G CAR PR R
Sbjct: 85 LGLQVSAKTVSRRLHAAGFCARRPRKVR 112
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 23.8 bits (49), Expect = 6.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 504 YGSWPFAGLLLTCSFLRYPPDSVDN 430
+GSW + G ++ L+ PDS DN
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDS-DN 189
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.8 bits (49), Expect = 6.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3
Query: 191 SNSITNFTNKAFFSLHS 141
SN+I NFT KAF L S
Sbjct: 520 SNNIENFTRKAFKDLPS 536
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,665
Number of Sequences: 2352
Number of extensions: 17051
Number of successful extensions: 26
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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