Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B22
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0202 - 1638978-1639571                                           73   2e-13
02_01_0158 - 1103461-1104186                                           73   3e-13
03_06_0157 - 32039020-32039175,32039267-32039338,32039478-320396...    30   2.9  
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679...    29   5.0  
04_04_1582 - 34590698-34591199,34593849-34594690                       29   5.0  
12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003...    29   6.6  
11_01_0357 + 2715271-2715509,2716200-2716281,2717117-2717251,271...    29   6.6  
03_01_0483 + 3689155-3689814                                           29   6.6  
03_06_0609 - 35042276-35042388,35042476-35042527,35042624-350427...    28   8.7  
03_05_0145 + 21254448-21255488                                         28   8.7  
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329...    28   8.7  

>08_01_0202 - 1638978-1639571
          Length = 197

 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +3

Query: 225 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVA 404
           +E+V GTVKWF+   G+GFI  +D  ED+FVHQ+++  +      RS+ DG+ VEF+V +
Sbjct: 3   SERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSD----GYRSLNDGDVVEFSVGS 58

Query: 405 GEKG-FEAAGVTGPGGEPVK-GSPYAADKRRGY 497
           G  G  +A  VT PGG  +  GS  +    RGY
Sbjct: 59  GNDGRTKAVDVTAPGGGALTGGSRPSGGGDRGY 91


>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 72.9 bits (171), Expect = 3e-13
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 225 AEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVA 404
           A +  GTVKWFN   G+GFI+ +D  ED+FVHQ++I  +      RS+ +GE VEFA+  
Sbjct: 4   AARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKAD----GFRSLAEGEQVEFAISE 59

Query: 405 GEKG-FEAAGVTGPGGEPVKG 464
            E G  +A  VTGP G  VKG
Sbjct: 60  SEDGRTKAVDVTGPDGSFVKG 80


>03_06_0157 -
           32039020-32039175,32039267-32039338,32039478-32039602,
           32039678-32040559,32040623-32040692,32041248-32041739,
           32041985-32042044,32042541-32042618,32043322-32044344
          Length = 985

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 375 GEAVEFAVVAGEKGFEAAGVTGPGGEPVKG 464
           GE+ E  ++ GE   E   V GPGGEP  G
Sbjct: 388 GESKEDEIIEGEPDPEMEVVAGPGGEPKVG 417


>05_02_0119 +
           6793292-6793613,6795793-6795952,6796416-6796458,
           6797015-6797335
          Length = 281

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 29/94 (30%), Positives = 35/94 (37%), Gaps = 13/94 (13%)
 Frame = +3

Query: 252 WFNVKSGYGF-INRNDTKEDVFVHQTAIARNNPRKAVRSVGDGE--------AVEFAVVA 404
           W NV SG      R   +E   V      R +P +A   +  G           E   VA
Sbjct: 8   WINVSSGLDSGRQRGRRREGALVAWGGAQRTSPVEAAARMESGGWHRRTSMIVREELEVA 67

Query: 405 GE----KGFEAAGVTGPGGEPVKGSPYAADKRRG 494
           G+     G EA G +GPGGE         D RRG
Sbjct: 68  GDGRRASGVEAPGGSGPGGERTMAPANIDDSRRG 101


>04_04_1582 - 34590698-34591199,34593849-34594690
          Length = 447

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 369 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 491
           GDG   E +   G+KG    G  G GG   KGS  ++++ R
Sbjct: 229 GDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQER 269


>12_02_0362 +
           17998110-17998345,17998877-17998958,18000309-18000392,
           18000600-18000734,18001395-18001570,18001654-18001805,
           18003730-18004575,18004961-18005301
          Length = 683

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 113 GERRWWQRW*NTPRPLLDVPNNL 45
           GE+ WWQ +  TPR L +V N +
Sbjct: 272 GEKVWWQEFDVTPRQLEEVSNQM 294


>11_01_0357 +
           2715271-2715509,2716200-2716281,2717117-2717251,
           2717428-2717457,2717486-2717661,2717743-2717894,
           2718395-2719083
          Length = 500

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 113 GERRWWQRW*NTPRPLLDVPNNL 45
           GE+ WWQ +  TPR L +V N +
Sbjct: 255 GEKVWWQEFDVTPRQLEEVSNQM 277


>03_01_0483 + 3689155-3689814
          Length = 219

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 369 GDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 494
           GDG A      AG  G +AA   G G +PV+GS   +D  RG
Sbjct: 62  GDGGADPVRGSAG--GSDAARGDGGGADPVRGSAGGSDAARG 101


>03_06_0609 -
           35042276-35042388,35042476-35042527,35042624-35042725,
           35043546-35043745,35045258-35045336,35045541-35045595,
           35045947-35046122,35046386-35046988,35047077-35047265,
           35048150-35048201,35048289-35048356,35048873-35048911,
           35048912-35048970,35049639-35049782,35050136-35050238,
           35050368-35050467,35050596-35050612
          Length = 716

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 440 TSNTSCFKAFLPGNHGKLHRLSVADRAHSLTWVVTGDGSLMHK 312
           T N   ++ FLP   G +  L + D   ++ W ++ + SL HK
Sbjct: 293 TENDCAWQRFLPS--GPIALLPIGDNYSNIVWTMSPEESLRHK 333


>03_05_0145 + 21254448-21255488
          Length = 346

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 494 LPPPIFPSXKVADEAVKELHAEED*DVVDPRPTKGVHKEMRVKKE 628
           LPPP+     V +E VKE+ +E    V  PRP     KE+  +KE
Sbjct: 35  LPPPVV----VEEEEVKEVLSETAVPVSRPRPPPEPEKEVVKRKE 75


>01_06_0756 -
           31731607-31731752,31732368-31732467,31732716-31732943,
           31733390-31733474,31733583-31733662,31733755-31733826,
           31733964-31734058,31735442-31735523,31735646-31735927
          Length = 389

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
 Frame = +3

Query: 219 VIAEKVSGTVKWFNVKSGYGF--INRNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEF 392
           +++EK  GT    +V+S +    +N N + ED+  HQ   A+   +   +S G G+  + 
Sbjct: 281 MVSEKNGGTD---SVESAFDNENVNSNISHEDMHQHQKVNAKGGRKGRYKSQGRGQIQQN 337

Query: 393 AVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGY 497
               G     A   +    +P+ G P   D  RG+
Sbjct: 338 TSGQGHVSSPATSGSDHVNKPIPG-PRMPDGTRGF 371


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,274,852
Number of Sequences: 37544
Number of extensions: 379455
Number of successful extensions: 1367
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1364
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)