Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B22
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   5.4  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   5.4  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   5.4  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   5.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   5.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   7.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   7.2  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 363 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 449
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 363 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 449
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 363 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 449
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 363 SVGDGEAVEFAVVAGEKGFEAAGVTGPGG 449
           ++GD E    AV   ++GF A+G  G GG
Sbjct: 201 TIGD-EQQSHAVSPNQRGFSASGGGGSGG 228


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +2

Query: 608 EMRVKK-EALYHLSAVFSVAFSRWTPWGRSW 697
           E+ VKK +A+YH   +F+V  S+   +G +W
Sbjct: 289 EIIVKKVKAIYHTLNMFNVDVSKKCLFGEAW 319


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 767  DFVLPAPAGIARTHSAEPSSIHWARTS 687
            DF+L     + R H A  SS+H  R +
Sbjct: 3330 DFILQRLQSVLREHCATDSSVHVRRNA 3356


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 752 APAGIARTHSAEPSSIHWARTSPTASTAKMRRKK 651
           +P    R+ S  P+S  W R+ PT+   ++ R++
Sbjct: 273 SPPARRRSRSTRPTS--WPRSRPTSKPKRLPRRR 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,361
Number of Sequences: 2352
Number of extensions: 12735
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)