Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B21
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0822 + 28352941-28353825,28353863-28354016,28354714-283547...    32   0.53 
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534...    29   4.9  
07_01_0368 + 2739908-2740320,2740437-2740816,2740893-2740977,274...    29   6.5  
06_01_0799 - 5964410-5964565,5964709-5964750,5968762-5968803,596...    29   6.5  

>04_04_0822 +
           28352941-28353825,28353863-28354016,28354714-28354754,
           28355060-28355310,28355411-28355591,28356138-28356323,
           28356396-28356569,28356992-28357150,28357424-28357501,
           28357612-28357748,28357980-28358044,28358115-28358148,
           28358216-28358372,28359135-28359196,28360041-28360118,
           28360940-28361042
          Length = 914

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 363 KKSVDSAEENMKDELDELSTKQENGILYQYELPIEQDSDGQWTRTLVKTPSSSVVTKAL 539
           K   DS  +    E+D +  ++++G+ +  EL  E D DG +  T V+     VV KAL
Sbjct: 200 KDDDDSDGDVGASEVDGVEAEEDDGVNWS-ELENEDDEDGDYGETKVEVEEGDVVGKAL 257


>09_04_0741 -
           19852339-19852497,19853185-19853246,19853352-19853415,
           19853561-19853614,19853744-19853890,19854460-19854564,
           19854651-19854794,19854987-19855093,19855613-19855712,
           19855804-19855833,19856492-19856608,19856705-19856828,
           19857143-19857189,19857272-19857400,19857777-19857852,
           19858446-19858543,19858630-19858671,19858811-19859044
          Length = 612

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +3

Query: 306 FKQQCLTSNQMLQECVEEYKKSVDSAEENMKDELDELST-KQENGILYQYELPIEQDS 476
           FK+ C+  +++    V+EYKK V    E  +  + ++ T  Q+NG       P EQD+
Sbjct: 543 FKKWCIMQSKIKSGAVDEYKKEVQEMLEFAESYMRKVRTSNQDNG------TPTEQDN 594


>07_01_0368 +
           2739908-2740320,2740437-2740816,2740893-2740977,
           2741053-2741167,2741493-2741615
          Length = 371

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 351 VEEYKKSVDSAEENMKDELDELSTKQENGI 440
           +EE+ +SVDS  E +  EL +LS  Q N +
Sbjct: 97  LEEWTRSVDSQLEEILTELQQLSAAQMNAV 126


>06_01_0799 -
           5964410-5964565,5964709-5964750,5968762-5968803,
           5968903-5968998,5970549-5970630,5973820-5974001
          Length = 199

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = +3

Query: 270 LNCVDKLINAYEFKQQCLTSNQMLQECVEEYKKSVDSAEENM--KDELDELST 422
           L  ++K + A   +  C    Q +QE  E  +K +  AEENM  +D++ ++ T
Sbjct: 102 LQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEENMRLRDQMPQVPT 154


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,500,954
Number of Sequences: 37544
Number of extensions: 320425
Number of successful extensions: 824
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)