Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B20
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442...    29   5.0  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.8  

>10_08_0106 +
           14842748-14843085,14843122-14843250,14844145-14844211,
           14847177-14847324,14847998-14848097,14848306-14848384,
           14848527-14848687,14848829-14848908,14849319-14849475,
           14849575-14849723,14849909-14850076,14850426-14850719,
           14851002-14851046,14851213-14851462,14851707-14851835,
           14852799-14853039,14853977-14854642
          Length = 1066

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
 Frame = +1

Query: 679 QDFKDXXRFPPGXXPXAPXCSDPGRLPGYXSALXSPSGXAXGPFPIXSPXXGYPXXXXXG 858
           +D+K    F        P     G  P +   +  P      PFP   P  GYP     G
Sbjct: 640 EDWKPYQDFGAENFAGMPMGPAGGFNPYWGGGMPLPMDYMGAPFPGPMPYMGYP----PG 695

Query: 859 PFPPXXGWV-PXPP 897
           PF P  G V P  P
Sbjct: 696 PFDPFGGGVLPQDP 709


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
 Frame = +1

Query: 703 FPPGXXPXAPXCSDPGRLPGYXSALXSPSGX-----AXGPFPIXSPXXGYPXXXXXGPFP 867
           FPP   P  P    P + P Y   +  P G      A  P P   P   +      GP P
Sbjct: 18  FPPQPPPMNPYGPPPPQQPAYGH-MPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGP 76

Query: 868 PXXGWVPXPP 897
           P     P PP
Sbjct: 77  PQQQQPPPPP 86


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 379 NESAN---ARGEAVCVLGALPLPRSLTRCAR 462
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,989,607
Number of Sequences: 37544
Number of extensions: 342033
Number of successful extensions: 740
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)