Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B16
         (877 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    68   4e-13
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    26   1.7  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   7.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 67.7 bits (158), Expect = 4e-13
 Identities = 43/140 (30%), Positives = 66/140 (47%)
 Frame = +2

Query: 392 RENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRGTGNTST 571
           RE     E+ RR+K+   I ELS MVP  +   R+ DK  +LR +   ++     G +  
Sbjct: 224 REARNRAEKNRRDKLNGSIQELSAMVPHVAESPRRVDKTAVLRFSAHGLRVDYVFGKSKP 283

Query: 572 DGTYKPSFLTDQELKHLILEAADGFLFVVSCDTGRIIYVSDSIAPVLNYSQGEWYSSCLY 751
           + T KP      E +  +    +GFL  V+C  G+I+ VS S+   L + Q + Y   L+
Sbjct: 284 EETVKP------EAQDSLFRMLNGFLLTVTC-RGQIVLVSPSVEQFLGHCQTDLYGQNLF 336

Query: 752 DQVHPDDVEKYESS*VHKNL 811
              HPDD    +   +  NL
Sbjct: 337 TLTHPDDHALLKQQLIPSNL 356


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 12/50 (24%), Positives = 28/50 (56%)
 Frame = +3

Query: 255 SPGLTQQRIYKNAVLAVLDQMKTTEVVENTQGWRRTIFKTRSVLQVVKII 404
           +PG   +R+  + +  V++  ++  + EN  G+RR     RS +Q ++++
Sbjct: 504 NPGKVYERLLLSRINDVIEDPESPRLAENQYGFRR----GRSTVQAIQLV 549


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 169 YFIHNS*MFPTIT*NKYLQYFTRHKRHFPLQQPTTFKIRQTGQI 38
           YFI +  M   I+ N+YL+Y T     +  +  T  +I   G++
Sbjct: 742 YFISHDEMMADISANEYLEYGTHEDAMYGTKLETIRRIHADGKM 785


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 675  RPVSQLTTNKKPSAASKI 622
            RP S L  +K PSAASK+
Sbjct: 2945 RPESTLIFDKLPSAASKV 2962


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 893,555
Number of Sequences: 2352
Number of extensions: 18190
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)