Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B15
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747           30   2.2  

>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
          Length = 368

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 24/72 (33%), Positives = 33/72 (45%)
 Frame = +1

Query: 127 QQLAVIGMDCLLLLVVALPRRKKPREXLPTRALRPRSTLTRKXTNALSSQSVGXGGSAKR 306
           Q++ VIG   +  LV  L +  K  E  P  A  P +        A ++   G GG  K+
Sbjct: 51  QKVVVIGNVSVDTLVKKLVKTGKHAEPWPEPAPPPPAAA------AAANSPGGGGGGKKK 104

Query: 307 KTALNKNQNP*N 342
           K   NKN+NP N
Sbjct: 105 KKNKNKNKNPAN 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,840,988
Number of Sequences: 37544
Number of extensions: 242038
Number of successful extensions: 529
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)