Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B12
         (962 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.28 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   2.0  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   6.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   6.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.28
 Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 7/65 (10%)
 Frame = -2

Query: 859 GXXGGAXXGGKRGXXXXTXRGGAXP-------PXXGGGFFXXVXXGGXGPV*KNPXPGXP 701
           G  GG   GG  G      R  A         P  GGG       GG G     P PG  
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227

Query: 700 XGGGG 686
            GGGG
Sbjct: 228 GGGGG 232


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 19/77 (24%), Positives = 22/77 (28%)
 Frame = -2

Query: 913 GKKGGKXXFXPPXXXEXGGXXGGAXXGGKRGXXXXTXRGGAXPPXXGGGFFXXVXXGGXG 734
           G+KG      PP      G  G     G +G           PP   G        G  G
Sbjct: 63  GEKGNSGPVGPPGAPGRDGMPGAPGLPGSKGVKGDPGLSMVGPPGPKGNPGLRGPKGERG 122

Query: 733 PV*KNPXPGXPXGGGGP 683
            +     PG P   G P
Sbjct: 123 GMGDRGDPGLPGSLGYP 139


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 18/54 (33%), Positives = 20/54 (37%)
 Frame = -2

Query: 850 GGAXXGGKRGXXXXTXRGGAXPPXXGGGFFXXVXXGGXGPV*KNPXPGXPXGGG 689
           GG   GG+ G      RG       GGG F     GG G   +N   G P   G
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGRGGRDGGGGF-----GGGGYGDRNGDGGRPAYSG 113


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.0 bits (42), Expect(2) = 6.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -3

Query: 603 GXXXXPPPPXKPP 565
           G    PPPP  PP
Sbjct: 779 GIGSPPPPPPPPP 791



 Score = 21.0 bits (42), Expect(2) = 6.0
 Identities = 7/15 (46%), Positives = 7/15 (46%)
 Frame = -3

Query: 588 PPPPXKPPXGGXXXG 544
           PPPP  PP      G
Sbjct: 783 PPPPPPPPPSSLSPG 797


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,729
Number of Sequences: 2352
Number of extensions: 10476
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)