Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B09
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0285 - 24136865-24137000,24137554-24137611,24138142-241414...    29   5.0  
03_01_0250 - 1937650-1939071,1939375-1939468,1939665-1939870,193...    29   5.0  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    28   8.7  

>04_04_0285 -
           24136865-24137000,24137554-24137611,24138142-24141480,
           24141789-24142218,24142861-24142928,24143015-24143165
          Length = 1393

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
 Frame = +3

Query: 270 KGLVDLNVLKT-EIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGVRPCVGNEYANHI 446
           KG  D +V++T ++E A  + ++ +  KK   K+       S  + G +   G ++   +
Sbjct: 400 KGRHDESVVETSKMESASTSKSVAKKRKK--TKNVSSVDMASLDIAGEKDQCGTKHVQFV 457

Query: 447 NDAQNSTNQL----IDFVCYKD------GDRI---ALFIAEGGPECFQQKTENLKTCFL- 584
           +DAQ +TN +    ID + +KD      GD +    L    G     +     ++T  L 
Sbjct: 458 SDAQATTNSVADKGIDDLVHKDYKDPTMGDMVNSSELVACAGESTKVRHDESGIETSKLE 517

Query: 585 -NLKQSFPTVESANNLSLVEKCAKVDEMTSCIVKSLEECSTPTPANMAESLIKFMRKDSL 761
            + K      +S  + S  +K  K  +++S  ++SL+           E+L+K    D L
Sbjct: 518 KSSKSILEETQSVGHTSQQKKRKKAKKVSSVDMESLDISGEKDQCGYGENLVK---SDKL 574

Query: 762 AT 767
           AT
Sbjct: 575 AT 576


>03_01_0250 -
           1937650-1939071,1939375-1939468,1939665-1939870,
           1939986-1940132
          Length = 622

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = -1

Query: 823 LVLTERSLTXQSICLGQSGVARESLRMNLISDSAMLAGVGVEHSSR--DFTIQEVISST- 653
           L++ E+  + +S+CLG      ++    +I   + L  + V H S+  D    ++I+++ 
Sbjct: 298 LLMAEKCSSLESVCLGGFSRVTDTGFRAIIHSCSGLHKLRVSHGSQFTDLVFHDIIATSL 357

Query: 652 -FAHFSTR-LKLLADSTVGKLCFKFKKHVL 569
              H S R   LL D  + +L F    +VL
Sbjct: 358 CLTHVSLRWCNLLTDVGIERLSFNKDLNVL 387


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 306 IEEAKPNGALDEVF-KKYCDKSAQLKGCISSVLQGVRPCVGNEYANHINDAQNSTNQLID 482
           I+ A P+G   + F KK    + Q    +S ++Q +      +Y    N+A+ +TN L+D
Sbjct: 421 IDNASPSGFNTQAFLKKRSRATNQPVESMSMIMQFIETQGFLDYLERCNNAEENTNNLLD 480


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,785,488
Number of Sequences: 37544
Number of extensions: 442520
Number of successful extensions: 1175
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)