Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B08
         (1033 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0285 + 28183108-28183209,28183495-28183754,28183950-281842...    29   4.5  

>01_06_0285 +
           28183108-28183209,28183495-28183754,28183950-28184237,
           28184385-28184495,28184815-28184905,28185146-28185214,
           28185627-28185716,28185887-28185937,28186040-28186258,
           28186371-28186490
          Length = 466

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +1

Query: 31  WNSLRFCXVILSQAIELLKLFKRTFLCVLPFLFKYNRRCLFYHSCWVTGPAXRHNHWPSR 210
           WNS +   ++LS   +  KL     LC L   +       + H  WV      HN   S 
Sbjct: 214 WNSRK---IVLSVNYDFTKLKDELQLCALILSYSPKNESTWSHRRWVIKKVSEHNQDVSE 270

Query: 211 LVDQD 225
           L++ +
Sbjct: 271 LIEME 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,608,683
Number of Sequences: 37544
Number of extensions: 255429
Number of successful extensions: 507
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3036070960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)