Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_B05
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024757-3|AAF59448.2| 414|Caenorhabditis elegans Hypothetical ... 32 0.63
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 5.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 5.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 5.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 5.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 5.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 5.8
AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical... 29 5.8
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical... 29 5.8
>AC024757-3|AAF59448.2| 414|Caenorhabditis elegans Hypothetical
protein Y37E11AL.6 protein.
Length = 414
Score = 31.9 bits (69), Expect = 0.63
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 273 WEHWRASEMAFYTLTFVPTSKTLNTN 196
W W++S AFYT +P S T N+N
Sbjct: 82 WIEWKSSRSAFYTTAQMPISATKNSN 107
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 612 ESWKKLLRTLIEAENLCNVFKYYGVDK 692
ESWKKLL L+E ++L + Y DK
Sbjct: 294 ESWKKLLEKLLEKDDLVIHYFYRNEDK 320
>Z81476-3|CAB03922.3| 592|Caenorhabditis elegans Hypothetical
protein C25F9.4 protein.
Length = 592
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 612 ESWKKLLRTLIEAENLCNVFKYYGVDK 692
ESWKKLL L+E ++L + Y DK
Sbjct: 293 ESWKKLLEKLLEKDDLVIHYFYRNEDK 319
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 570 SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 737
S D I E + +GE + +LR + +NL + Y+G+D Y GL+ + +
Sbjct: 1529 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1586
Query: 738 QNIGARL 758
+ I A L
Sbjct: 1587 ETIAAVL 1593
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 570 SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 737
S D I E + +GE + +LR + +NL + Y+G+D Y GL+ + +
Sbjct: 1743 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1800
Query: 738 QNIGARL 758
+ I A L
Sbjct: 1801 ETIAAVL 1807
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 570 SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 737
S D I E + +GE + +LR + +NL + Y+G+D Y GL+ + +
Sbjct: 1879 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1936
Query: 738 QNIGARL 758
+ I A L
Sbjct: 1937 ETIAAVL 1943
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 570 SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 737
S D I E + +GE + +LR + +NL + Y+G+D Y GL+ + +
Sbjct: 1920 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1977
Query: 738 QNIGARL 758
+ I A L
Sbjct: 1978 ETIAAVL 1984
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 570 SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 737
S D I E + +GE + +LR + +NL + Y+G+D Y GL+ + +
Sbjct: 1931 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1988
Query: 738 QNIGARL 758
+ I A L
Sbjct: 1989 ETIAAVL 1995
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 570 SIDDIDEDLDTVKGESWKKLLRTLIEAENLCNVFKYYGVDK----YLTSSGLTVLPEHRG 737
S D I E + +GE + +LR + +NL + Y+G+D Y GL+ + +
Sbjct: 1932 SADCISESYRSTEGEEYCNILRPFLRGQNLYSF--YFGLDSVNPMYRPKDGLSGRIQRKN 1989
Query: 738 QNIGARL 758
+ I A L
Sbjct: 1990 ETIAAVL 1996
>AF003141-12|AAP68910.1| 946|Caenorhabditis elegans Hypothetical
protein W02D3.10b protein.
Length = 946
Score = 28.7 bits (61), Expect = 5.8
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Frame = +3
Query: 294 FKGKERDGKPAKMYQIRDMDDAKEKCLELMKSTFLRDEPLCDVLEINRDPVSIETIMKNW 473
F + +D + ++RD+D E EL+ + D L + L+ D + E I
Sbjct: 185 FNQRWKDFVAVFIKKVRDIDQI-ELDDELLPGSDAADNILFEWLKTTEDVDAFELI---- 239
Query: 474 EEYVAQNVSLACYTEVDGEPDELVGFNIVLVKSIDDIDEDLDTVKGESWKKL-LRTLIEA 650
E A + S +D DE++ I + S DD+D + +WK L L T E
Sbjct: 240 SEISASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDMDSERKRRSIMTWKSLILTTKTEK 299
Query: 651 ENL 659
E L
Sbjct: 300 ERL 302
>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
protein W02D3.10a protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.8
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Frame = +3
Query: 294 FKGKERDGKPAKMYQIRDMDDAKEKCLELMKSTFLRDEPLCDVLEINRDPVSIETIMKNW 473
F + +D + ++RD+D E EL+ + D L + L+ D + E I
Sbjct: 185 FNQRWKDFVAVFIKKVRDIDQI-ELDDELLPGSDAADNILFEWLKTTEDVDAFELI---- 239
Query: 474 EEYVAQNVSLACYTEVDGEPDELVGFNIVLVKSIDDIDEDLDTVKGESWKKL-LRTLIEA 650
E A + S +D DE++ I + S DD+D + +WK L L T E
Sbjct: 240 SEISASSSSGITTPSIDRFCDEVIVEKIGIDTSSDDMDSERKRRSIMTWKSLILTTKTEK 299
Query: 651 ENL 659
E L
Sbjct: 300 ERL 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,649,395
Number of Sequences: 27780
Number of extensions: 352562
Number of successful extensions: 1016
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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