Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B04
         (880 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   9.3  
AY341224-1|AAR13788.1|  287|Anopheles gambiae TOLL9 protein.           23   9.3  
AY341223-1|AAR13787.1|  287|Anopheles gambiae TOLL9 protein.           23   9.3  
AY341222-1|AAR13786.1|  287|Anopheles gambiae TOLL9 protein.           23   9.3  
AY341221-1|AAR13785.1|  287|Anopheles gambiae TOLL9 protein.           23   9.3  
AY341220-1|AAR13784.1|  287|Anopheles gambiae TOLL9 protein.           23   9.3  
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           23   9.3  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   9.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.3  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 383 IQGFEYQQSLTGYVKGFSRRFWQGNTTHR 469
           + GF+  Q + G + G   R WQ   + R
Sbjct: 74  LDGFDNGQRVCGMLSGIPHRKWQEEVSFR 102


>AY341224-1|AAR13788.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 437 LRNLLHNQSRIAG 399
           LRN+LHN++ +AG
Sbjct: 47  LRNILHNRTDVAG 59


>AY341223-1|AAR13787.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 437 LRNLLHNQSRIAG 399
           LRN+LHN++ +AG
Sbjct: 47  LRNILHNRTDVAG 59


>AY341222-1|AAR13786.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 437 LRNLLHNQSRIAG 399
           LRN+LHN++ +AG
Sbjct: 47  LRNILHNRTDVAG 59


>AY341221-1|AAR13785.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 437 LRNLLHNQSRIAG 399
           LRN+LHN++ +AG
Sbjct: 47  LRNILHNRTDVAG 59


>AY341220-1|AAR13784.1|  287|Anopheles gambiae TOLL9 protein.
          Length = 287

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 437 LRNLLHNQSRIAG 399
           LRN+LHN++ +AG
Sbjct: 47  LRNILHNRTDVAG 59


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -3

Query: 437 LRNLLHNQSRIAG 399
           LRN+LHN++ +AG
Sbjct: 274 LRNILHNRTDVAG 286


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 793 STFEP---DGXTAFQYLFRYIWQRRRSKPMFILWKGYVQQ 683
           ++F+P   DG  +F  + R+ W R   KP     +GY QQ
Sbjct: 128 ASFDPEGDDGQGSFAEVVRHKWGRNTGKP-----RGYQQQ 162


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 734 LPDIAKQILECRGPIWLKR*VSPKAGRLHER 826
           L  +++ ++    P+W K     + GRL ER
Sbjct: 779 LASVSESVMRYAAPVWSKELQKREPGRLLER 809


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 887,643
Number of Sequences: 2352
Number of extensions: 19253
Number of successful extensions: 39
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94266828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)