Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_B04
(880 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019625-1|AAH19625.1| 222|Homo sapiens ChaC, cation transport ... 127 5e-29
BC001847-1|AAH01847.1| 222|Homo sapiens ChaC, cation transport ... 127 5e-29
BC001683-1|AAH01683.1| 222|Homo sapiens ChaC, cation transport ... 127 5e-29
BC053896-1|AAH53896.1| 184|Homo sapiens ChaC, cation transport ... 115 2e-25
BC025376-1|AAH25376.1| 184|Homo sapiens ChaC, cation transport ... 115 2e-25
BC019239-1|AAH19239.1| 184|Homo sapiens ChaC, cation transport ... 115 2e-25
AC007883-2|AAY24351.1| 184|Homo sapiens unknown protein. 115 2e-25
BC017941-1|AAH17941.1| 184|Homo sapiens ChaC, cation transport ... 112 1e-24
AY702027-1|AAW23972.1| 177|Homo sapiens cation transport protei... 81 5e-15
BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor, argini... 30 9.6
AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein. 30 9.6
AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of white-apr... 30 9.6
AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white apr... 30 9.6
>BC019625-1|AAH19625.1| 222|Homo sapiens ChaC, cation transport
regulator homolog 1 (E. coli) protein.
Length = 222
Score = 127 bits (307), Expect = 5e-29
Identities = 68/128 (53%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAFLVAAEN-SV 568
F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TWG A+ V E S
Sbjct: 47 FAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQGEQVSK 106
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
AL YL RE LGGY T V F+P A K AL Y+A P+N +LG AP IA
Sbjct: 107 ALKYLNVREAVLGGYDTKEVTFYPQ---DAPDQPLK-ALAYVATPQNPGYLGPAPEEAIA 162
Query: 749 KQILECRG 772
QIL CRG
Sbjct: 163 TQILACRG 170
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 777 SGSNVEYLLRLADFMR 824
SG N+EYLLRLADFM+
Sbjct: 172 SGHNLEYLLRLADFMQ 187
>BC001847-1|AAH01847.1| 222|Homo sapiens ChaC, cation transport
regulator homolog 1 (E. coli) protein.
Length = 222
Score = 127 bits (307), Expect = 5e-29
Identities = 68/128 (53%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAFLVAAEN-SV 568
F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TWG A+ V E S
Sbjct: 47 FAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQGEQVSK 106
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
AL YL RE LGGY T V F+P A K AL Y+A P+N +LG AP IA
Sbjct: 107 ALKYLNVREAVLGGYDTKEVTFYPQ---DAPDQPLK-ALAYVATPQNPGYLGPAPEEAIA 162
Query: 749 KQILECRG 772
QIL CRG
Sbjct: 163 TQILACRG 170
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 777 SGSNVEYLLRLADFMR 824
SG N+EYLLRLADFM+
Sbjct: 172 SGHNLEYLLRLADFMQ 187
>BC001683-1|AAH01683.1| 222|Homo sapiens ChaC, cation transport
regulator homolog 1 (E. coli) protein.
Length = 222
Score = 127 bits (307), Expect = 5e-29
Identities = 68/128 (53%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAFLVAAEN-SV 568
F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TWG A+ V E S
Sbjct: 47 FAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQGEQVSK 106
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
AL YL RE LGGY T V F+P A K AL Y+A P+N +LG AP IA
Sbjct: 107 ALKYLNVREAVLGGYDTKEVTFYPQ---DAPDQPLK-ALAYVATPQNPGYLGPAPEEAIA 162
Query: 749 KQILECRG 772
QIL CRG
Sbjct: 163 TQILACRG 170
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 777 SGSNVEYLLRLADFMR 824
SG N+EYLLRLADFM+
Sbjct: 172 SGHNLEYLLRLADFMQ 187
>BC053896-1|AAH53896.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 115 bits (277), Expect = 2e-25
Identities = 65/155 (41%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAF-LVAAENSV 568
F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G WG A+ L +
Sbjct: 15 FPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEE 74
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
YL RE GGY+T V F+P P T+ LLYI +N +LG APL DIA
Sbjct: 75 VKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDNPDYLGPAPLEDIA 128
Query: 749 KQILECRGPIWLKR*VSPKAGRLHERXIPEALDDH 853
+QI GP + +PE D+H
Sbjct: 129 EQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEH 163
>BC025376-1|AAH25376.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 115 bits (277), Expect = 2e-25
Identities = 65/155 (41%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAF-LVAAENSV 568
F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G WG A+ L +
Sbjct: 15 FPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEE 74
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
YL RE GGY+T V F+P P T+ LLYI +N +LG APL DIA
Sbjct: 75 VKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDNPDYLGPAPLEDIA 128
Query: 749 KQILECRGPIWLKR*VSPKAGRLHERXIPEALDDH 853
+QI GP + +PE D+H
Sbjct: 129 EQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEH 163
>BC019239-1|AAH19239.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 115 bits (277), Expect = 2e-25
Identities = 65/155 (41%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAF-LVAAENSV 568
F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G WG A+ L +
Sbjct: 15 FPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEE 74
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
YL RE GGY+T V F+P P T+ LLYI +N +LG APL DIA
Sbjct: 75 VKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDNPDYLGPAPLEDIA 128
Query: 749 KQILECRGPIWLKR*VSPKAGRLHERXIPEALDDH 853
+QI GP + +PE D+H
Sbjct: 129 EQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEH 163
>AC007883-2|AAY24351.1| 184|Homo sapiens unknown protein.
Length = 184
Score = 115 bits (277), Expect = 2e-25
Identities = 65/155 (41%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAF-LVAAENSV 568
F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G WG A+ L +
Sbjct: 15 FPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEE 74
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
YL RE GGY+T V F+P P T+ LLYI +N +LG APL DIA
Sbjct: 75 VKAYLDFRE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDNPDYLGPAPLEDIA 128
Query: 749 KQILECRGPIWLKR*VSPKAGRLHERXIPEALDDH 853
+QI GP + +PE D+H
Sbjct: 129 EQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEH 163
>BC017941-1|AAH17941.1| 184|Homo sapiens ChaC, cation transport
regulator homolog 2 (E. coli) protein.
Length = 184
Score = 112 bits (270), Expect = 1e-24
Identities = 64/155 (41%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAF-LVAAENSV 568
F YQ L GY+ +SRRFWQG+T HRG KPGRV TL+ED G WG A+ L +
Sbjct: 15 FPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEE 74
Query: 569 ALPYLTKRECKLGGYKTCVVNFHPTPFLPATRADKKDALLYIALPENKHWLGSAPLPDIA 748
YL E GGY+T V F+P P T+ LLYI +N +LG APL DIA
Sbjct: 75 VKAYLDFGE--KGGYRTTTVIFYPKD--PTTK--PFSVLLYIGTCDNPDYLGPAPLEDIA 128
Query: 749 KQILECRGPIWLKR*VSPKAGRLHERXIPEALDDH 853
+QI GP + +PE D+H
Sbjct: 129 EQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEH 163
>AY702027-1|AAW23972.1| 177|Homo sapiens cation transport
protein-like protein protein.
Length = 177
Score = 81.0 bits (191), Expect = 5e-15
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +2
Query: 392 FEYQQSLTGYVKGFSRRFWQGNTTHRGTEDKPGRVATLIEDKEGITWGKAFLVAAENS 565
F Y S G+V+G+SRRFWQG+T HRG++ PGRV TL+ED EG TWG A+ V E +
Sbjct: 47 FAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQGEQN 104
Score = 31.1 bits (67), Expect = 5.5
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 777 SGSNVEYLLRLADFMR 824
SG N+EYLLRLADFM+
Sbjct: 127 SGHNLEYLLRLADFMQ 142
>BC080554-1|AAH80554.1| 659|Homo sapiens splicing factor,
arginine/serine-rich 16 protein.
Length = 659
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 448 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 576
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 400 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 443
>AY358944-1|AAQ89303.1| 594|Homo sapiens SWAP2 protein.
Length = 594
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 448 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 576
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 415 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 458
>AF042810-1|AAC82340.1| 659|Homo sapiens suppressor of
white-apricot homolog 2 protein.
Length = 659
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 448 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 576
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 400 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 443
>AF042800-1|AAC82339.1| 659|Homo sapiens suppressor of white
apricot homolog 2 protein.
Length = 659
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 448 AREHHSSWNRR*AGSRRHS-NRGQGRNNLG*SVFGGRRKQRSTA 576
AR SW+R + SRR+S +R +GR + G G R RS A
Sbjct: 400 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPA 443
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,482,973
Number of Sequences: 237096
Number of extensions: 2829417
Number of successful extensions: 8766
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8743
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -