Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B04
         (880 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    24   1.6  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.8  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   3.7  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   3.7  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   4.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   4.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   4.9  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   8.6  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 156 FFIYIHISRF*ILNLHYNLNNFYAKSYPSLFRSYC 52
           FFIY+H S    L+L+  ++ FY    P L    C
Sbjct: 135 FFIYVHPSATFSLDLNKVVSVFYTAVIPMLNPFIC 169


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +1

Query: 724 IGAFARYSETNTGMPWXHLAQTLSIS*GW 810
           + A A+++   TG PW     T     GW
Sbjct: 341 VEALAKWANGQTGFPWIDAIMTQLREEGW 369


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 245 TISIIKAVCVCI 280
           TI II A+CVC+
Sbjct: 3   TIVIISAICVCV 14


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 245 TISIIKAVCVCI 280
           TI II A+CVC+
Sbjct: 3   TIVIISAICVCV 14


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 245 TISIIKAVCVCI 280
           TI II A+C+C+
Sbjct: 3   TILIISAICICV 14


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 238 KCYYFNYKSCLCLYTKMDKLRNE 306
           +C Y  Y+ CL +  K + ++ E
Sbjct: 161 RCQYCRYQKCLAMGMKREAVQEE 183


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 238 KCYYFNYKSCLCLYTKMDKLRNE 306
           +C Y  Y+ CL +  K + ++ E
Sbjct: 161 RCQYCRYQKCLAMGMKREAVQEE 183


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +2

Query: 719 LGSAPLPDIAKQILECRGPIWLKR*VSPKAGRLHERXIPEALDD 850
           L S PLP     +     P ++   VSP   +   R I + +DD
Sbjct: 475 LPSLPLPGADDDLFGPASPAYVHEDVSPTFEKPLVREIEKTIDD 518


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,814
Number of Sequences: 438
Number of extensions: 5547
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)