Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B02
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379     30   2.8  
12_01_0971 - 9781887-9781924,9782036-9782247,9782327-9784114,978...    29   3.7  
01_01_0752 - 5808798-5810183                                           29   4.9  
08_01_0389 + 3437383-3437651,3438279-3438396,3438914-3439018,343...    28   8.6  

>12_01_0987 - 10016203-10017165,10017346-10018180,10019532-10020379
          Length = 881

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = +1

Query: 322 ALLAEKMDHHPEWFNVYNKLQVTLSSHDVNGLSKRDIKMASFMDKNYN*TFFLVYNGV 495
           +LLA K D   +W  V+N L    SS    G+S  DI + S+ D  Y+    L+Y  V
Sbjct: 387 SLLASKSDTKDQWEQVHNSLSSAFSS---QGMS--DILLLSYYDLPYHLKTCLLYLSV 439


>12_01_0971 -
           9781887-9781924,9782036-9782247,9782327-9784114,
           9784630-9785432
          Length = 946

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 322 ALLAEKMDHHPEWFNVYNKLQVTLSSHDVNGLSKRDIKMASFMDKNY 462
           +LL+ K D   +W  V+N + VTL+S DV     R I M S+ D  Y
Sbjct: 373 SLLSIKPDTEDQWMQVHNSIGVTLNS-DV---EVRKILMLSYYDLPY 415


>01_01_0752 - 5808798-5810183
          Length = 461

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 283 KILMKLLDS*PGXALLAEKMDHHPEWFNVYNKLQVTLSS-HDVNGLSKRDIKMASFMDKN 459
           ++L +LLD  P   +  EK+  HP WF    K  V LS  ++ N L  +D+  A   D  
Sbjct: 241 RLLSRLLDPNPNIRITVEKLVEHP-WFKKGYKPAVMLSQPNESNNL--KDVHTAFSADHK 297

Query: 460 YN 465
            N
Sbjct: 298 DN 299


>08_01_0389 +
           3437383-3437651,3438279-3438396,3438914-3439018,
           3439983-3440180,3440269-3440355
          Length = 258

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 768 NKFNIHXITTEVNSNFDILVSFV 700
           +KFN+H I  +   NFD++ SF+
Sbjct: 124 SKFNMHVIPVDKTGNFDMMYSFL 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,673
Number of Sequences: 37544
Number of extensions: 273350
Number of successful extensions: 395
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 395
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)