Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_B02
         (888 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098993-8|AAC67465.2|  142|Caenorhabditis elegans Pterin carbin...    74   1e-13

>AF098993-8|AAC67465.2|  142|Caenorhabditis elegans Pterin
           carbinolamine dehydrataseprotein 1 protein.
          Length = 142

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 325 LLAEKMDHHPEWFNVYNKLQVTLSSHDVNGLSKRDIKMASFMD 453
           L AEKMDHHPEWFNVYNK+ +TLS+HD  GLS  D+K+A+F++
Sbjct: 95  LKAEKMDHHPEWFNVYNKVDITLSTHDCGGLSPNDVKLATFIE 137



 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = +3

Query: 183 LNQXERTTELKPLLESGWKIQSNRDAIEKEFQFKNFNEAFGFMTR 317
           L + ERT +L  L  +GWK+   RDAI+KEF FK+FNEAFGFMTR
Sbjct: 48  LTESERTEQLSGLKTAGWKLVEGRDAIQKEFHFKDFNEAFGFMTR 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,412,963
Number of Sequences: 27780
Number of extensions: 293366
Number of successful extensions: 666
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)